Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 1000 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  110 bits (274), Expect = 3e-28
 Identities = 79/241 (32%), Positives = 131/241 (54%), Gaps = 18/241 (7%)

Query: 261 EAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGER 320
           +A +   + +T  LA++SH+++TPL  I+G    L   S  L  E +Q +  +I+  G R
Sbjct: 602 KAAESANAAKTEFLANMSHEIRTPLNGIMGMMQLLV--STPLDDEQKQYVSNAISSSG-R 658

Query: 321 LNRSLTKLLDITRYTASALVPKLDWVEPEELIGTV--LSRLAPRLTHHKVQIESQPMLVE 378
           L++ L+ +LD++R  A  LV + + V P EL+  +  L  L  R +  ++ +E  P L +
Sbjct: 659 LSQLLSDVLDLSRIEAGGLVLRDECVTPSELLDAIKDLFTLGTRSSQVELALEISPGLPQ 718

Query: 379 ---LDSLLIEQVLINLVENAAKYTPRG------SEIEIACAYQEQQFTLAVMDNGAGIPD 429
              LD   + Q+L NLV NA K+T +G       E+ I    + Q   ++V D G GIP 
Sbjct: 719 HILLDGGRLRQILFNLVGNALKFTEKGHIHVRLDELAIHGGMR-QLLLISVEDTGIGIPQ 777

Query: 430 EALPRIFDRFYRVEGNHA---DGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIPC 486
            A+  IF+ FY+V+G+H     G GLGL+I + +V A  G++ + + E  G    +++P 
Sbjct: 778 GAMRDIFNPFYQVDGSHVRRQGGVGLGLSIVRRLVIAMGGALCIDSAEGEGTRIHLSLPF 837

Query: 487 R 487
           R
Sbjct: 838 R 838