Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 1039 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (269), Expect = 1e-27
 Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 270 RTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGERLNRSLTKLL 329
           ++  LA++SH+++TPL AI+G +  L         E +QE ++ I      L + ++ +L
Sbjct: 679 KSAFLANMSHEIRTPLNAIVGFSGILASTE---EEEEKQEYVSIIENNNTLLLQLISDIL 735

Query: 330 DITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKVQIE----SQPMLVELDSLLIE 385
           D+++  A  L      VE  +L+  + +    +L    V++E     +P    ++   + 
Sbjct: 736 DLSKIEAGTLDLHYSNVEINDLMKDLENMCQLKLKSDAVKLEFVAPEEPCFAHIEKNRLS 795

Query: 386 QVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFYRVEGN 445
           Q++INLV NA K+T +GS I      Q  +    V D G GIP +    IF RF ++  +
Sbjct: 796 QLIINLVTNAIKFTIQGS-IRFGYKRQNNELYFYVADTGCGIPQDKQKSIFGRFVKLN-S 853

Query: 446 HADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIPCRQ 488
            A GTGLGL+ICQ +V    G I V + E  G+ F  T+P +Q
Sbjct: 854 FAQGTGLGLSICQTLVEHMGGKIGVESEEGNGSTFWFTLPYKQ 896