Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., two-component system histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (254), Expect = 3e-26
 Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 23/241 (9%)

Query: 260 VEAEKQLEST---RTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAE 316
           +EA K+ E +   +   LA++SH+++TPL AI+G +  +      LS E + + +  I+ 
Sbjct: 260 IEARKKAEESDRLKMAFLANMSHEIRTPLNAIVGFSDVIGSTYDELSEEERADFVRLISI 319

Query: 317 QGERLNRSLTKLLDITR---------YTASALVPKLDWVEPEELIGTVLSRLAPRLTHHK 367
             E L R +  +LD+++         +T  +L   +  VE E+ +  +           +
Sbjct: 320 NSEHLVRLIDDVLDLSKIESNTIKFTFTDCSLRSLMIDVEKEQTMKPISE------IEIR 373

Query: 368 VQIESQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQE---QQFTLAVMDNG 424
             + ++ + +  D+  ++QV+ N + NA K+T +G  I    A          + V D G
Sbjct: 374 ALLPNEDVYINTDATRLKQVISNFINNARKFTEKG-YIHFGYAVDSVDASSVHVFVEDTG 432

Query: 425 AGIPDEALPRIFDRFYRVEGNHADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTI 484
           +GIP E    IFDRFY+V+     GTGLGL+IC+ IV   QG I V +    G+ F VT+
Sbjct: 433 SGIPKECQKEIFDRFYKVD-TFKQGTGLGLSICKTIVEHLQGDISVESEMGKGSRFIVTL 491

Query: 485 P 485
           P
Sbjct: 492 P 492