Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 1639 a.a., chemotaxis protein CheY from Burkholderia phytofirmans PsJN

 Score =  107 bits (267), Expect = 3e-27
 Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 17/241 (7%)

Query: 261 EAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTL--------TDPSLHLSTETQQELLT 312
           EA  +++  +TT  +++SH+ +TPL  ++G    L        +  +    ++     L 
Sbjct: 351 EALAEIDRAKTTFFSNISHEFRTPLTLMLGPLEELLARPQPGPSGNNAQTRSDIDDRALI 410

Query: 313 SIAEQ-GERLNRSLTKLLDITRYTASALVPKLDWVE----PEELIGTVLSRLAPRLTHHK 367
            I  + G RL + +  LLD +R  A  +       +      EL     S +       +
Sbjct: 411 EITHRNGLRLLKLVNALLDFSRIEAGRIEIHTQPTDIAAFTAELASLFQSAMEAAGLRLE 470

Query: 368 VQIESQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGI 427
           V+I + P++V+LD  + E+V++NL+ NA K+T  G+ + +A         ++V D+G G+
Sbjct: 471 VEIPATPVVVQLDREMWEKVVMNLLSNAYKFTFFGT-VRVAVRAVTGGVEVSVTDSGIGV 529

Query: 428 PDEALPRIFDRFYRVEG---NHADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTI 484
            +E +PR+F+RF+RV G      +G+G+GLA+ Q +V  H G++RV +    GACFTV++
Sbjct: 530 AEEEVPRLFERFHRVAGAPGRSVEGSGIGLAMVQELVKLHGGTVRVDSVLGEGACFTVSL 589

Query: 485 P 485
           P
Sbjct: 590 P 590



 Score = 49.7 bits (117), Expect = 8e-10
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 379  LDSLLIEQVLINLVENA-------AKYTPRGSEIEIACAYQE--------QQFTLAVMDN 423
            +D   +E  L+NL  NA        K T       +  AY +        Q   LAV D 
Sbjct: 1226 VDPFQVENALLNLAINARDAMSGHGKLTIEAGNAALDDAYAKRNAEVTPGQYVMLAVTDT 1285

Query: 424  GAGIPDEALPRIFDRFYRVEGNHADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVT 483
            GAG+  E   R+F+ F+  +     GTGLGL++    V    G +++++ E  G    + 
Sbjct: 1286 GAGMSPEVRERVFEPFFTTKAE-GQGTGLGLSMVYGFVKQSGGHVKIYSEEGHGTTIRIY 1344

Query: 484  IP 485
            +P
Sbjct: 1345 LP 1346