Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (298), Expect = 2e-31
 Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 8/235 (3%)

Query: 244 LTLSLARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLS 303
           LT S    H  R    +E + QL   R ++L SVSHDL+TPL  IIG+ TTL +    LS
Sbjct: 106 LTSSKLAEHYRRQQQALE-QAQL---RNSILLSVSHDLRTPLATIIGTLTTLKEYQAKLS 161

Query: 304 TETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRL 363
            +  +EL+ S A +  RL++ +  LL  T+     L   LD     E++   ++R   + 
Sbjct: 162 PKQNEELIDSAAAESHRLHQYIENLLQATKLQHGVLKFSLDEANLREVLQRTIARF--QT 219

Query: 364 THHKVQIESQPML--VELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVM 421
              ++QI S+P L  + + S LIEQ + N+++NA +Y+P    + +     +Q   + + 
Sbjct: 220 AQPRIQIHSEPELPPLMICSSLIEQAIFNVLDNALRYSPAELPVTVNLYRHQQLLRIDIQ 279

Query: 422 DNGAGIPDEALPRIFDRFYRVEGNHADGTGLGLAICQVIVAAHQGSIRVHNRESG 476
           D G GI       IF+ FYR   +   G GLGLA+ + I+ AH+GSI   +   G
Sbjct: 280 DLGQGIAPADAEAIFELFYRQHPSTDGGAGLGLAVAKGIITAHRGSIGAESVAQG 334