Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., GTP-binding protein EngA (RefSeq) from Shewanella amazonensis SB2B

 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 30/180 (16%)

Query: 23  AIPQVDVIIEVLDARIPFSSENPLIS-HIRG-EKPCVKVLNKRDLADPE----------L 70
           AI + DV++ + DAR   ++ +  I+ H+R  +K    V NK D  D +          L
Sbjct: 78  AIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKVDGIDADSACGEFWQLGL 137

Query: 71  TELWIAHLEQEKGV------------KAMAITTSNPQEV---HKILELCRKLAPQREEIG 115
            E++     Q +GV            +AM +   +  EV    +        A Q+    
Sbjct: 138 GEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTDERNYTEEEAEAEQQRLAE 197

Query: 116 KNIRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQ---NGIVLSDTPGI 172
           + I+  I+G PNVGKST+ N + G       +QP  TR    I ++      VL DT G+
Sbjct: 198 QPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYIPMERDGRNYVLIDTAGV 257



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQ--RINLQN-GIVLSDTPGI 172
           ++G PNVGKST+ N L     A   + P +TR ++  R +L     ++ DT GI
Sbjct: 7   LVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60