Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., ribosomal biogenesis GTPase (RefSeq) from Shewanella amazonensis SB2B

 Score =  404 bits (1039), Expect = e-117
 Identities = 198/308 (64%), Positives = 252/308 (81%), Gaps = 4/308 (1%)

Query: 5   SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64
           +IQW+PGHMHKA+KEI EA+PQVD++IEVLDARIP+SSENP+++ +RG+KPC+K+LNK D
Sbjct: 2   AIQWYPGHMHKAQKEIAEAMPQVDLVIEVLDARIPYSSENPMVAKLRGDKPCIKLLNKCD 61

Query: 65  LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKIL-ELCRKLAPQREEIGKNIRTMIM 123
           LADP +TE WIAHLE+E+GVKAMA+TT  P  +  ++ EL RKL P+R+   K+IRTMIM
Sbjct: 62  LADPAITEAWIAHLEKEQGVKAMAVTTLQPGHLKTVIPELVRKLVPERDRADKDIRTMIM 121

Query: 124 GIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSG 183
           GIPNVGKSTIINTLAGR IA+TGN+PAVT+ QQRINL+NGIVLSDTPGILWPKV+N  S 
Sbjct: 122 GIPNVGKSTIINTLAGRVIAKTGNEPAVTKAQQRINLKNGIVLSDTPGILWPKVDNEASS 181

Query: 184 FRLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEEIGRKRG 243
           +RLA TGA+KDTAMEY++VA +   +    YP  LKERY++DEL + DV L+E+IGRKRG
Sbjct: 182 YRLAVTGAIKDTAMEYEDVALFAAAFFRDAYPAELKERYKLDELSDDDVALLEDIGRKRG 241

Query: 244 ALRAGARVDLHKASEILLHELRQGVLGQITLERPEMITEELQQVEIDEALKAEEKAKRKE 303
           ALR+G  VDLHKA+E+LLHE R G LG ++LE PEM   E+++ E++  L AE++A R+E
Sbjct: 242 ALRSGGYVDLHKAAELLLHEFRSGKLGLLSLETPEM--AEIEKAEVERIL-AEKEALRQE 298

Query: 304 ERRKRYLR 311
           +     LR
Sbjct: 299 KLAAEKLR 306