Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., 50S ribosome-binding GTPase from Methanococcus maripaludis S2

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 13/276 (4%)

Query: 1   MVNNSIQWFP----GHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISH--IRGEK 54
           M+NNS++        +    R+ + + I + ++++ V+DAR P ++ N  +    I   K
Sbjct: 1   MLNNSVKHLKMDNMENKIPMRRMVHKIIYECNIVLLVVDARDPETTRNRALEEYTIEKNK 60

Query: 55  PCVKVLNKRDLADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEI 114
             + V+NK DL   ++ E W    + E    ++   ++  +   K+L    K       I
Sbjct: 61  KLIYVINKSDLVPKKILEKWKNKFKSENPDSSVVFVSAKEKLGTKMLRDEIKTYLNSNNI 120

Query: 115 GKNIRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILW 174
            K  +  I+G PNVGKS+IIN L G+  A++G    +T  +Q + L   I L D+PGI+ 
Sbjct: 121 -KYGQVGIVGYPNVGKSSIINALTGKKSARSGLTAGLTVGEQWVKLTKDIKLLDSPGIIE 179

Query: 175 PKVENPHSGFRLAATGAVK-DTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVE 233
           PK E+      L  +GA++ + A +    A   +  +       LKE Y  +   E ++E
Sbjct: 180 PKDED-----ELVISGALRYEKADDIISPALKILNRIHTFDNTILKEYYGFEIGEEINIE 234

Query: 234 LMEEIGRKRGALRAGARVDLHKASEILLHELRQGVL 269
           L+E+IG K   L    ++D+ + S+ ++ E + G L
Sbjct: 235 LLEKIGTKLNFLTKDGKIDIDRTSKSIIREFQNGKL 270