Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., 50S ribosome-binding GTPase from Methanococcus maripaludis JJ

 Score = 96.7 bits (239), Expect = 8e-25
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 17/278 (6%)

Query: 1   MVNNSIQWFPGHMHK----ARKEIEEAIPQVDVIIEVLDARIPFSSENPLISH--IRGEK 54
           M+NNS++       +     R+ + + I + ++++ V+DAR P ++ N  +    I   K
Sbjct: 1   MLNNSVKHLKMDTMENKIPMRRMVHKIIYECNIVLLVVDARDPETTRNRALEEYTIEKNK 60

Query: 55  PCVKVLNKRDLADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEI 114
             + V+NK DL   ++ E W    + E    ++   ++  +   K+L    K       I
Sbjct: 61  KLIYVINKSDLVPKKILEKWKNKFKSENPDSSVVFVSAKEKLGTKMLRDEIKTYLNSNSI 120

Query: 115 GKNIRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILW 174
            K  +  I+G PNVGKS+IIN L G+  A++G    +T  +Q + L   I L D+PGI+ 
Sbjct: 121 -KYGQVGIVGYPNVGKSSIINALTGKKSARSGLTAGLTVGEQWVKLTKDIKLLDSPGIIE 179

Query: 175 PKVENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKHYP---ERLKERYQIDELPETD 231
           PK E+      L  +GA++    + D+V    ++ L++ +      LKE Y  +   E +
Sbjct: 180 PKDED-----ELVISGALR--YEKADDVISPALKILSRIHTFDNTILKEYYGFEIGEEIN 232

Query: 232 VELMEEIGRKRGALRAGARVDLHKASEILLHELRQGVL 269
           +EL+E+IG K   L    ++D+ + S+ ++ E + G L
Sbjct: 233 IELLEKIGTKLNFLTKDGKIDIDRTSKSIIREFQNGKL 270