Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., GTP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  409 bits (1050), Expect = e-119
 Identities = 202/305 (66%), Positives = 247/305 (80%), Gaps = 1/305 (0%)

Query: 5   SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64
           +IQW+PGHMHKARKEIEEA+PQVD++IEVLDARIP+SSENP++S +RG+KPC+K+LNK D
Sbjct: 2   AIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVSKLRGDKPCIKLLNKSD 61

Query: 65  LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEIGKNIRTMIMG 124
           LADPE+T  WI +LE+E+GVKA AITT  P  +  + +LCRKL P R++  K+IRTMIMG
Sbjct: 62  LADPEVTAQWIEYLEREQGVKATAITTLQPGMLKMLPDLCRKLVPSRDKTEKDIRTMIMG 121

Query: 125 IPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSGF 184
           IPNVGKSTIINTLAGR IA+TGN+PAVT+ QQRINL+NGIVLSDTPGILWPKV+N  S +
Sbjct: 122 IPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPKVDNEASSY 181

Query: 185 RLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEEIGRKRGA 244
           RLA TGA+KDTAMEY++VA +   Y  K YP+ + ERY I ELP+ D+ L+EEIGRKRGA
Sbjct: 182 RLAVTGAIKDTAMEYEDVALFAAGYFLKAYPKEICERYNISELPKDDMALLEEIGRKRGA 241

Query: 245 LRAGARVDLHKASEILLHELRQGVLGQITLERPEMITEELQQVEIDEALKAEEKAKRKE- 303
           LR G R+DLHKASE+LLHE R G +G ++LE P M   E  +VE   A KA EKA + E 
Sbjct: 242 LRPGGRIDLHKASELLLHEYRSGKIGLLSLETPAMAEIEKAEVERILAEKAAEKAAKLEA 301

Query: 304 ERRKR 308
           E+ KR
Sbjct: 302 EKLKR 306