Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., GTPase Der from Enterobacter sp. TBS_079

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 37/185 (20%)

Query: 23  AIPQVDVIIEVLDARIPFS-SENPLISHIRG-EKPCVKVLNKRDLADPE----------L 70
           AI + DV++ ++DAR     +++ +  H+R  EKP   V NK D  D +          L
Sbjct: 78  AIEEADVVLFMVDARAGLMPADSAIAKHLRSREKPTFLVANKTDGIDADQAVADFWSLGL 137

Query: 71  TELWIAHLEQEKGVKAMAITT--------SNPQEVHKILELCRKLAPQREEIGKN----- 117
            E++       +GV ++  T         + P+E+ +  E   +   +  E G+      
Sbjct: 138 GEIYPIAASHGRGVTSLLETVLLPWVDEVNPPEEIDEDAEYWAQF--EDGEAGEEEPEDD 195

Query: 118 -------IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNG---IVLS 167
                  I+  I+G PNVGKST+ N + G       + P  TR    I +Q      VL 
Sbjct: 196 FNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLI 255

Query: 168 DTPGI 172
           DT G+
Sbjct: 256 DTAGV 260



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVTR 153
           ++G PNVGKST+ N L     A   + P +TR
Sbjct: 7   LVGRPNVGKSTLFNRLTRTRDALVADFPGLTR 38