Pairwise Alignments

Query, 329 a.a., GTP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., cobalamin synthesis protein/P47K family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  228 bits (582), Expect = 1e-64
 Identities = 138/364 (37%), Positives = 199/364 (54%), Gaps = 46/364 (12%)

Query: 1   MINRVPTNIITGFLGVGKTTAILHLLATKPAHEKWAVLVNEFGEIGIDGAIMS--EQGAM 58
           ++  +PTNIITGFLGVGKT+ I  LL TKP  E WAVLVNEFGE+GID  +++    G  
Sbjct: 2   IVKAIPTNIITGFLGVGKTSLIKQLLKTKPEGETWAVLVNEFGEVGIDACLLAANNSGVQ 61

Query: 59  IKEVPGGCLCCTAGVPMSVGINALL-RQKPDRLIIEPTGLGHPKQVVATLISEQYQPYVD 117
           I+EV GGC+CC AGVP  V IN L+ R KPDRL+IEPTGLGHP +++  L +  YQ  + 
Sbjct: 62  IREVAGGCMCCAAGVPTQVAINQLIARAKPDRLLIEPTGLGHPNEIIKVLSAPHYQHVIR 121

Query: 118 LKATIALMDPRHLSMDKYRSNQNFNDQLASADIVLGNKVDQCSSSDIDAFNDWVTD---- 173
           L++T+ L+D R L  ++YR + NF  QL  AD+++  K D     + +A +D   D    
Sbjct: 122 LQSTLCLIDARKLMDERYRGHDNFIQQLQVADVIITTKTD--LYPEFEALHDQQLDLELA 179

Query: 174 ---------QTPAKTFSQLIKQGQFPIELL-----DMPRLVGHASTHIDSHHHH------ 213
                     TP    S         +E L     D+PR   + +  + S          
Sbjct: 180 QYLNALQLVDTPVVEHSASQGLSTRLLEYLKQPRRDIPRAPSYKAASVVSQPQSLLLNSA 239

Query: 214 ----------HAADEPQFQLAPQQPFLRKENRGQGYFSCGWLFGAEYQFNFDLLFQLLND 263
                      +  E    + PQ+  +RK+N+G+G FSCGW+F    +F+FD L Q +++
Sbjct: 240 ETLGLQGVFAKSVSEDGDYIEPQER-VRKQNQGEGCFSCGWVFNPLQEFDFDKLMQFISE 298

Query: 264 LTAE-----RVKGVLNTDRGCYAFNVANGVVSVTEMSLDGFESRLEVIDSQLMPWSELES 318
            T       RVK V+ T  G    N ++G ++VTE+  D  +SRLE+I +Q + W  +E 
Sbjct: 299 QTQVNPTLLRVKAVMITSDGIAGINWSDGDMAVTELD-DSLDSRLEMIATQDLDWDRIEQ 357

Query: 319 ILLK 322
            L++
Sbjct: 358 ALVE 361