Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., chloride channel from Xanthomonas campestris pv. campestris strain 8004

 Score =  124 bits (310), Expect = 8e-33
 Identities = 99/387 (25%), Positives = 176/387 (45%), Gaps = 26/387 (6%)

Query: 76  LWLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMG 135
           +W A  L     A + +       P   GSGIP++  A++   P      L ++   G  
Sbjct: 59  IWWALLLTPGIFALLAWLTSGALRP-TRGSGIPQVIAALEHPDPAFRETNLSLRVSVGKL 117

Query: 136 ALGS-----GMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNA 190
           AL +     G  +GREGPTV +G ++  +    F  +        L AG A G+AAAFN 
Sbjct: 118 ALTTLSLLGGASVGREGPTVHVGASLMHVFGRWFGFREPRELSHFLLAGGAAGIAAAFNT 177

Query: 191 PLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTL 250
           PLAG++F IEE+  +F +       ++ + +   +V   + G            P     
Sbjct: 178 PLAGVVFAIEELSGRFEHRFSG--TLLTAVIVGGVVSLGLLGNYTYFGKVAVALPLGKAW 235

Query: 251 GLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRY-LLTGSMIG-GCFGLLLLYVP 308
              LL G++ G+ G LF  ++  +     ++    R+R+ +L  ++ G    GL L++  
Sbjct: 236 LAILLCGSVAGLLGGLFARMVLASVSGRPRWLAALRQRHPVLLAALCGVALVGLALVFGQ 295

Query: 309 ELTGGGISLIPTITNG----GYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTL 364
              G G     ++  G    G+  G++      ++   L+ + +G PGG+F+P LA+G  
Sbjct: 296 GAFGTGYEQARSLVQGHAVVGHEFGLM------KLVANLVSYVAGIPGGLFSPALAVGAG 349

Query: 365 FGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLI 424
            G+   ++        +++P  F + GM A      +AP+T  ++ +E+T+   ++LP++
Sbjct: 350 LGHNLSVLMP------SVDPRTFVLLGMCAYLTGVTQAPLTSAVISLELTDTSQMLLPIL 403

Query: 425 ITSLGAVIFAQLLGGQPIYSQLLHRTL 451
            T L A   + L+   PIY  L  + L
Sbjct: 404 ATVLLARAVSGLVCKTPIYRGLAEQLL 430



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 19/195 (9%)

Query: 38  LLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGYFLVHR 97
           LL G +AGL+G  F + V      R  WL + +    P+ LAA      +A +G  LV  
Sbjct: 239 LLCGSVAGLLGGLFARMVLASVSGRPRWL-AALRQRHPVLLAAL---CGVALVGLALV-- 292

Query: 98  FAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVG 157
           F   A G+G  +    + G   V     L +K    + +  +G+  G   P + +G  +G
Sbjct: 293 FGQGAFGTGYEQARSLVQGHAVVGHEFGL-MKLVANLVSYVAGIPGGLFSPALAVGAGLG 351

Query: 158 RMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISVRAVI 217
             +S +  + + D R + +  G    L     APL   +  +E         L     ++
Sbjct: 352 HNLSVL--MPSVDPR-TFVLLGMCAYLTGVTQAPLTSAVISLE---------LTDTSQML 399

Query: 218 ISAVAANIVFRVING 232
           +  +A  ++ R ++G
Sbjct: 400 LPILATVLLARAVSG 414