Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Cl- channel, voltage gated from Pseudomonas syringae pv. syringae B728a

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 106/406 (26%), Positives = 182/406 (44%), Gaps = 58/406 (14%)

Query: 27  DKTPFSVLFLSL--LVGILAGLVGTYFEQAVHLVSETRTD--WLKSEIGSFLPLWLAAFL 82
           D  P+   +L+L  LV +LAG     F  ++   ++ R    W+         +WL    
Sbjct: 11  DLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWV---------IWLLP-- 59

Query: 83  ISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMV 142
           ++ F   + Y L+ +  P  AG+ +  I   +   + +   R++P+   G + +   G  
Sbjct: 60  VAGFAVGLAYHLIGK--PVDAGNNL--IIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGAS 115

Query: 143 LGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEM 202
           +GREG  VQMGGA+   ++ +FR++ ED R  +L AG + G A+ F  PLAG +F +E +
Sbjct: 116 VGREGTAVQMGGALADQLTHVFRLRRED-RRVILMAGISAGFASVFGTPLAGALFGLEVL 174

Query: 203 R-PQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLL----- 256
              + RY   ++   +++A+ A+ V     GQ   +    Y   E+  + L+ ++     
Sbjct: 175 AIGRMRYD--ALFPCVVAAIVADQV-----GQAWGVVHTHYVIGEVVPVQLWSVMAVVAA 227

Query: 257 GALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGIS 316
           G +FG+ G+LF    T     FVK         L+T S +    G LL+ V     G   
Sbjct: 228 GIVFGLTGLLF-ATATHKLGAFVK--------RLITYSPLRPFAGGLLIAVAVWALGSNH 278

Query: 317 LIPTITNGGYGAGILLLLF---------VGRIFTTLLCFGSGAPGGIFAPMLALGTLFGY 367
            I      G G   ++  F         +G++  T++  G+G  GG   P+  +G   G 
Sbjct: 279 YIDVDKYIGLGIPSIVQSFQMPMAPWDWLGKMVFTVVSLGTGFKGGEVTPLFYIGATLGN 338

Query: 368 AFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEM 413
           A         P L++  GM A  G  A+FA     P+  I++ +E+
Sbjct: 339 ALA-------PLLHLPFGMLAGIGFVAVFAGAANTPLATIVMAMEL 377