Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., chloride channel protein from Synechocystis sp000284455 PCC 6803

 Score =  194 bits (493), Expect = 1e-53
 Identities = 123/398 (30%), Positives = 200/398 (50%), Gaps = 16/398 (4%)

Query: 57  LVSETRTDWLKSEIGSFLPLWLAAFLISAF-LAFIGYF--LVHRFAPEAAGSGIPEIEGA 113
           LV +   +WL S   S    + A +++  F L F G    L+ +F+  A G GIP+++ A
Sbjct: 45  LVIKNGVNWLGSSRLSLADTYGAIWVLPCFGLVFGGLAGALIEQFSRPAGGGGIPQVKAA 104

Query: 114 MDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRH 173
           +        WRV  VK  G +  LG GM LGR  PTV +G A+   +S  F    E  R 
Sbjct: 105 LARYPIPLDWRVAVVKLLGTVLVLGGGMTLGRRAPTVHIGAALAAQLSRWFPTSPEH-RR 163

Query: 174 SLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQ 233
            ++AAGAA GLAA F  P+AG++FV+EE+      + +++   I+++    +   V    
Sbjct: 164 QMIAAGAAAGLAAGFTTPIAGVLFVVEELMRDV--SSLTLETAIVASFVGAVTSLVFQSS 221

Query: 234 DAVITMPQYDAPEL----STLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRY 289
           D  +     ++P +      +  +LLLG L G+ GVL N  I   Q+    + R      
Sbjct: 222 DLNLAHSLSNSPTVRFTTGEIPFYLLLGILAGILGVLLNRSILSLQN----WQRKQNLSL 277

Query: 290 LLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSG 349
           ++   ++G   G+ +  +P        L   +T+G      ++L  V     T+L + + 
Sbjct: 278 VIRIGVVGLISGVAIALLPSFFRDNAGLREFVTSGELSWHQVVLTLVAHFILTILAYSTD 337

Query: 350 APGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILL 409
           APGG+FAP L +G+  GY  G     W  +  +    FA+AGMGA F + VR P+T I++
Sbjct: 338 APGGLFAPALVMGSALGYLVGEFGSYWQDQ--VTQTTFALAGMGAFFTSVVRVPVTAIII 395

Query: 410 VIEMTNNYHLILPLIITSLGAVIFAQLLGGQPIYSQLL 447
           V E+T N++++LPL++    + + A+ L  + +Y  LL
Sbjct: 396 VFELTGNFNVVLPLMVACATSYLVAESLFPRSLYDHLL 433