Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., H(+)/Cl(-) exchange transporter ClcA from Synechocystis sp000284455 PCC 6803

 Score =  336 bits (862), Expect = 8e-97
 Identities = 192/454 (42%), Positives = 276/454 (60%), Gaps = 15/454 (3%)

Query: 5   ETFKISLLAKMPKDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTD 64
           ET     L K+P+++ +   S        L  +++VG++ G++G  F+ AV+ + + R+ 
Sbjct: 6   ETSNRRWLDKLPRNLTDSARSLHPR---TLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQ 62

Query: 65  WLKSEIGSFLPL-WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWW 123
            L   +    PL WL   LIS  +  + ++L+ RFAP+ +GSGIP+IEG ++G  P+ W 
Sbjct: 63  -LAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIEGHLEGKLPLVWQ 121

Query: 124 RVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGG 183
           RVLP+K  GG  +LG+GM+ G EGPT+QMGG++G+M    F+   E+ R  L+A GA  G
Sbjct: 122 RVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKATQENQR-ILIAVGAGAG 180

Query: 184 LAAAFNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYD 243
           LA AFNAPLAG+  + EEM P+FR   ++  +++   V A I+ R+I GQ A+I++ ++ 
Sbjct: 181 LATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIRGQSAIISLTEFK 240

Query: 244 APELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLT---GSMIGGCF 300
              L +L +F++LG LFGV G  FN  +    D F      DR   L T   G ++G   
Sbjct: 241 RVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWF------DRLPPLATKWKGFLLGSII 294

Query: 301 GLLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLA 360
           G+L L+   LT GG + +    N       L+L+F GR   TL+C+GSGA GGIFAPML 
Sbjct: 295 GILSLFPLPLTDGGDNAVLWAFNSQSHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLG 354

Query: 361 LGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLI 420
           + ++   A      + FP    EP + AIAGMGAL AATVRAP+T ILL IEMT+NY +I
Sbjct: 355 IASIVSVAMARHFHLLFPSQIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVI 414

Query: 421 LPLIITSLGAVIFAQLLGGQPIYSQLLHRTLKNQ 454
           LPL++T L A + A+ LGG+PIY+ LL RTL  Q
Sbjct: 415 LPLLVTCLVASVVAEALGGKPIYTVLLERTLAKQ 448