Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., chloride channel protein from Rhodopseudomonas palustris CGA009

 Score =  125 bits (314), Expect = 3e-33
 Identities = 121/388 (31%), Positives = 175/388 (45%), Gaps = 51/388 (13%)

Query: 81  FLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGA-----MDGMRPVRWWRVLPVKFFGGMG 135
           F+++     +  +L +RF   A GSGIP+   A           +   R+   KF   + 
Sbjct: 63  FVVTPLGFLLSVYLTNRFFQNAQGSGIPQAIAARRLTDQTARAKLVSLRIAIGKFLLTLF 122

Query: 136 ALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHS--LLAAGAAGGLAAAFNAPLA 193
            L +G  +GREGPTVQ+G ++      +F +     R    L+ AGA+ G+AAAFN PLA
Sbjct: 123 GLLAGASVGREGPTVQIGASI------MFALGRFSPRRQPGLILAGASAGVAAAFNTPLA 176

Query: 194 GIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGL- 252
           GI+F IEEM   F     S   +I + VAA        G  ++  +  Y     S +GL 
Sbjct: 177 GIIFGIEEMSRSFETR--SSTLIIAAVVAA--------GLTSIALLGNYTYFGTSAMGLR 226

Query: 253 -------FLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLL 305
                      G + G  G LF   +  A      F+R      LL G  +  C     +
Sbjct: 227 GGIDWLAIPACGIVGGAAGGLFIRCVVAAGGS-AAFNRRPLIVALLCGLAVAICG---FV 282

Query: 306 YVPELTGGGISLIPTITNGGYGA----GILLLLFVGRIFTTLLCFGSGAPGGIFAPMLAL 361
               + G G S + T    G       G+L  L       T L   SG PGGIF+P LA+
Sbjct: 283 SGDTIYGTGYSQVKTALESGTALPEDFGVLKFL------ATTLSSVSGLPGGIFSPSLAV 336

Query: 362 GTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLIL 421
           G   G     +    FP   I   M  + GM A F+  V+APIT  ++VIEMT+N+ +++
Sbjct: 337 GAGLGSNVAAL----FPATPIAAIM--LLGMVAYFSGVVQAPITAFVIVIEMTDNHAMVI 390

Query: 422 PLIITSLGAVIFAQLLGGQPIYSQLLHR 449
           PL+ T+L A   ++L+  + IY  L  R
Sbjct: 391 PLMATALIAYATSRLIAEEGIYHALARR 418