Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., chloride channel protein from Rhodopseudomonas palustris CGA009

 Score =  117 bits (293), Expect = 1e-30
 Identities = 112/421 (26%), Positives = 186/421 (44%), Gaps = 44/421 (10%)

Query: 36  LSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLI----SAFLAFIG 91
           + LL G+L  ++    E A  ++     D   S  G     W    L+    +  L  IG
Sbjct: 50  IGLLSGLLVAIIWRLSEFAHAVLFNIPFDTRLSANGVIS--WQRTLLVPLGGAVILTIIG 107

Query: 92  YFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQ 151
            F   RF    A +   E      G   +R   ++ ++    + + G G  +G E    Q
Sbjct: 108 VFYAGRFKGRLADA--IEANALYGGRVSMRGSLLISLQT---LLSNGCGASVGLEAGYTQ 162

Query: 152 MGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLI 211
           +  A    I      +  D R  L+A GAAG ++AAF APLAG  F  E +     YT  
Sbjct: 163 ICAAFSSQIGQRLAARRADMR-LLVACGAAGAISAAFTAPLAGAFFAFEVVLGA--YTSA 219

Query: 212 SVRAVIISAVAANIVFRVINGQDAVITMPQYDAP-ELSTLGLFLLLGALFGVFGVLFNYL 270
           S+  VI SAV++ +V R +    + + +P    P  +  +G  +LLG L   F +L    
Sbjct: 220 SLVPVIASAVSSWLVMRNLV-HPSFLQIPGVPTPASVEMIGQTMLLGVLCAFFSILVMLA 278

Query: 271 ITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLI-PTITNGGYGAG 329
           +  ++ +F                 I    G L L +  L   G++L+ PT+   G+GA 
Sbjct: 279 VAFSERVF---------------QSISIWRGALRLVIGALLLSGLALLSPTVLGSGHGAM 323

Query: 330 ILLLL-----------FVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFP 378
            LLL+            + +   + +  G+G  GG+F   L LG+L G  +  +   +FP
Sbjct: 324 QLLLITNPTWLMLLTTLILKTLASAISLGAGFRGGLFFASLMLGSLIGQLYSTVLTPYFP 383

Query: 379 ELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLII-TSLGAVIFAQLL 437
           ++ ++PG  A+AGM AL    + AP + I L +E+T ++ + +  ++  S+ A+I  +L 
Sbjct: 384 DIALQPGTAAVAGMVALGTGVIGAPFSMICLALELTGDFWVTIGAVVAASMSALIVRELF 443

Query: 438 G 438
           G
Sbjct: 444 G 444