Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., putative voltage-gated CIC-type chloride channel from Phaeobacter inhibens DSM 17395

 Score =  133 bits (335), Expect = 1e-35
 Identities = 115/444 (25%), Positives = 200/444 (45%), Gaps = 16/444 (3%)

Query: 17  KDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVH-----LVSETRTDWLKSEIG 71
           +DV      +  +     F++LL+GI AG    +F + +      +      ++L S   
Sbjct: 21  RDVWRVLRHRGPSQIQFWFIALLIGIAAGFAALFFRKGITAFQAWVYGTEDVNFLHSFAQ 80

Query: 72  SFLPLWLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPE-IEGAMDGMRPVRWWRVLPVKF 130
                WL A      L  +G  L HRF P+A    + + IEGA  G   V   R      
Sbjct: 81  GMPWYWLVAIPTVGGL-LVGVIL-HRFTPDARVRSVADVIEGAALGDGRVEM-RAGLASA 137

Query: 131 FGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNED-TRHSLLAAGAAGGLAAAFN 189
                 L +G   GREGP V M G +   +S+  R++ +  T   LL    A  ++A+FN
Sbjct: 138 CASFITLSTGGSTGREGPVVHMAGVISTWVSN--RIQADGITGRDLLGCAVAAAVSASFN 195

Query: 190 APLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELST 249
           AP+AG +F +E +   F   + +   ++I++VA  ++ R+  G      +    A +   
Sbjct: 196 APIAGALFALEVVLRHF--AVHAFAPIVIASVAGTVINRLEYGDVTEFDLITPGALQFYV 253

Query: 250 -LGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVP 308
            L  FL+LG + G+  V+    I  A+ +        +    L  +  G   G++ ++ P
Sbjct: 254 ELPAFLMLGLICGLVAVVLMRSIFFAEQIGNALQDRLQLPRWLRPAASGLLLGVIAVWFP 313

Query: 309 ELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYA 368
            + G G         G       +L  + +     +  G    GG+F+P L +G L G A
Sbjct: 314 HIIGVGYETTVLALTGALVLHQTILFAMVKTAAVAITMGGRMGGGVFSPSLMVGALTGLA 373

Query: 369 FGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLII-TS 427
           FGLIA    P+++    ++A AGMGA+ AA + API+  L+V E+T ++ + L +++  S
Sbjct: 374 FGLIATAVLPDVSGTHTLYAFAGMGAVAAAVLGAPISTTLIVFELTGDWQIGLAVMVAVS 433

Query: 428 LGAVIFAQLLGGQPIYSQLLHRTL 451
           +   + ++++      +QL  R +
Sbjct: 434 MSTALASRIVDRSFFLTQLERRNI 457