Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., chloride channel protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  140 bits (354), Expect = 9e-38
 Identities = 123/437 (28%), Positives = 200/437 (45%), Gaps = 50/437 (11%)

Query: 18  DVINQFL-SKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSE-TRTDWLKSEIGSFLP 75
           D INQ+  SK      ++ L+++VGILAGL     +   H + E  ++DW          
Sbjct: 10  DQINQYRKSKISNRNFLIILAVIVGILAGLAAAALKSLTHHIEEFLQSDWH--------- 60

Query: 76  LWLAAFLISAFLAFIGYFLV-----HRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKF 130
            W   + +      IG FL      +        +G+  +  A+           +  + 
Sbjct: 61  -WKYKYYLYFIFPMIGIFLTVLYIKYFIRKTKFETGLTPLLYAISKKSSKVEAHNIYSQI 119

Query: 131 FGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNA 190
                 +G G   G E P V  G A+G  +  +  +   +    L+A GAA G+A AFN+
Sbjct: 120 ITAAVTVGFGGSTGLEAPIVTSGSAIGSNLGRLLGLSYREIT-MLVACGAAAGIAGAFNS 178

Query: 191 PLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTL 250
           P+AGI+F IE + P+F  T+ +   +++SA  A +V R+   Q     + +    +++ L
Sbjct: 179 PVAGIVFAIEILLPEF--TIPAFIPLLLSAATAAVVARLFYTQQLFFLVTE--GWKVNAL 234

Query: 251 GLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCF-GLLLLYVPE 309
             +++L    G+F + F       + LF K       ++  T  ++GG   G+L+   P 
Sbjct: 235 FYYVILACFIGLFSIYFTKANYAVKGLFYKI------KHPYTKVIVGGLMLGVLVFLFPT 288

Query: 310 LTGGGISLIPTITNGGYGAGI-------------LLLLF-VGRIF----TTLLCFGSGAP 351
           L G G   I  +  G Y A I             L++LF V  IF     TL+  G+G  
Sbjct: 289 LYGEGYITIKGLLKGDYQAVINNSIFADYNTIPALVVLFTVVTIFMKSIATLVTLGAGGN 348

Query: 352 GGIFAPMLALGTLFGYAFGLIAKM-WFPELNIEPGMFAIAGMGALFAATVRAPITGILLV 410
           GG FAP L +G L G+ F  +  +    +LN+    F +AGM A   + + AP+TGI L+
Sbjct: 349 GGTFAPSLIMGGLIGFIFAYVVNLSGLAQLNVSN--FIVAGMAAALGSIMHAPLTGIFLI 406

Query: 411 IEMTNNYHLILPLIITS 427
            E+T  Y L++PL+IT+
Sbjct: 407 AEITGGYILMVPLMITT 423



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 338 RIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFA 397
           +I T  +  G G   G+ AP++  G+  G   G +  + + E+     M    G  A  A
Sbjct: 118 QIITAAVTVGFGGSTGLEAPIVTSGSAIGSNLGRLLGLSYREIT----MLVACGAAAGIA 173

Query: 398 ATVRAPITGILLVIEMTNNYHLI---LPLIITSLGAVIFAQLLGGQPIY 443
               +P+ GI+  IE+      I   +PL++++  A + A+L   Q ++
Sbjct: 174 GAFNSPVAGIVFAIEILLPEFTIPAFIPLLLSAATAAVVARLFYTQQLF 222