Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., Cl- channel, voltage-gated family protein (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (351), Expect = 2e-37
 Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 23/315 (7%)

Query: 127 PVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAA 186
           P +FF  + AL +   +GREGP + +G     ++++ F++ +   R  + A+G A G+AA
Sbjct: 124 PGQFFQALFALATNFSVGREGPAIHLGAVSASVMAEKFKLPDNSVR-IMCASGIAAGIAA 182

Query: 187 AFNAPLAGIMFVIEEMRPQFR--YTLISVRAVIISAVAANIVFRVINGQDAV----ITMP 240
            FNAPLA ++FV E +  +++  Y    + + I  A+++ +VF  I+  D +    I + 
Sbjct: 183 TFNAPLAAVIFVFEVILREYKVHYFFPIMLSAICGALSSQLVFGNIHEYDQIGVSHIPLS 242

Query: 241 QYDAPELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCF 300
           QY         +  L G   G    LFN+ +       +K     ++  L+   +I G  
Sbjct: 243 QYP--------VLALCGVTLGCIAALFNHTL-------LKVTAKGQQHPLILRLLIAGLI 287

Query: 301 GLLL-LYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPML 359
             ++  ++P+  G G   I    +      +L+ L +G+I  T+   G G PGGI  P+ 
Sbjct: 288 TTIIGFFLPQALGSGDLAISHAISEHPSLALLVGLLLGKIIATIAAIGLGIPGGIIGPLF 347

Query: 360 ALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHL 419
            +G L G    +++ M FP +    G++ I GM A+    + AP+  ++ ++E+TNN  +
Sbjct: 348 GIGALIGAILAVVSAMLFPTITPYVGLYTIIGMTAMMGVCLSAPLAALVALLELTNNAAI 407

Query: 420 ILPLIITSLGAVIFA 434
           ILP +  ++ A + A
Sbjct: 408 ILPSMFVTIPAFLIA 422