Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., Chloride channel core (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (312), Expect = 7e-33
 Identities = 113/448 (25%), Positives = 192/448 (42%), Gaps = 31/448 (6%)

Query: 12  LAKMPKDVINQFLSKDKTPFSVLF--LSLLVGILAGLVGTYF----EQAVHLVS------ 59
           + +M K  +++FL   +T   V    L + +G+L+G     F    E   H +       
Sbjct: 1   MLRMLKKPVHEFLRLYRTVAYVRLGVLGMGLGLLSGCAAILFFLGIEAGKHYIQVVWAGL 60

Query: 60  -------ETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGYFLVHRFAPEAAGS---GIPE 109
                  ET     ++   ++ P  + A L       +  +LV RF P +      G   
Sbjct: 61  SLPAPAGETLFGHAEAAARAYRPWVIVAAL--GITGLVTGWLVQRFLPNSLDGMTDGTDA 118

Query: 110 IEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNE 169
           +  A    + V   R   +K    +  + +G   GREGP  Q+G  +G  +S    +   
Sbjct: 119 MIRAFHAEKGVIRRRAPLLKGLTSICTIAAGGSAGREGPVSQIGAGIGSWLSMRLGLSPR 178

Query: 170 DTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEM-RPQFRYTLISVRAVIISAVAANIVFR 228
           + R  L+ AGAAGGL A F APL G +  IE + R  F     ++   ++S+V +  +F 
Sbjct: 179 E-RRILMLAGAAGGLGAVFRAPLGGALTAIEVLYREDFESE--ALLPAVLSSVVSYSLFT 235

Query: 229 VINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLF-NYLITLAQDLFVKFHRNDRK 287
            + G   +  +P++    +  L  +LLL       G  +      L   +F K     R 
Sbjct: 236 FVFGTAPIFGIPRFSFTSVLELPWYLLLSLACAATGWAYVRTFRVLKYSVFGKLRA--RV 293

Query: 288 RYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFG 347
             + T ++ G   GL  +  P +   G   I     G      ++ + +G+   T +  G
Sbjct: 294 GIMWTTALGGVLMGLFGILYPPVLSDGYGWIEQAILGQLPVVTMVTILLGKTLATAVTLG 353

Query: 348 SGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGI 407
           SG  GG+FAP L +G + G   G  A+   P +  +PG + + GM A FA    API  +
Sbjct: 354 SGMSGGMFAPALFVGGMTGGVVGFAAQQVQPGVVTQPGGYVLVGMAAFFAGIAHAPIGPL 413

Query: 408 LLVIEMTNNYHLILPLIITSLGAVIFAQ 435
           ++V E+T  Y L+ PL+++S   ++  +
Sbjct: 414 VMVCELTQGYGLLAPLMLSSAVCILLGR 441