Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., chloride channel protein from Klebsiella michiganensis M5al

 Score =  102 bits (253), Expect = 3e-26
 Identities = 118/435 (27%), Positives = 190/435 (43%), Gaps = 52/435 (11%)

Query: 27  DKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEI---GSFL--------P 75
           +K  F+ L   +L GILAGL G      +H +      +   +I    SFL        P
Sbjct: 7   NKNSFTRLIAVVLTGILAGLSGMVLALILHAIQHLAFGYSPGQIVSAESFLQGVTDSSWP 66

Query: 76  LWLAAFLISAFLAFIGYFLVHRFAPE----AAGSGIPEIEGAMDGMRPVRWWRVLPVKFF 131
             ++A +    +A  G++L+ R+  +    AA    P +             +++ V   
Sbjct: 67  RRISAIVAGGAIAGFGWWLLGRYGQKRVSIAAAVANPSVPMPAGTTTIHALLQIVTV--- 123

Query: 132 GGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAP 191
               ALGS   LGRE    +MG     M++    +  ++TR +L+A GA  GLAA +N P
Sbjct: 124 ----ALGSP--LGREVAPREMGALGAGMVARKLGLTADETR-TLVACGAGAGLAAVYNVP 176

Query: 192 LAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQY----DAPEL 247
           LAG +F +E M   F +   ++ A+I SA+AA      +  +       QY    D    
Sbjct: 177 LAGALFSLEVMLLSFSWEK-TLAAIITSAIAAWTATLGLGDES------QYHFASDILPH 229

Query: 248 STLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYV 307
           S +   ++ G + G    LF    + A+   V+ +       LL  S++     +L LY 
Sbjct: 230 SFVWWAVITGPILGAGAWLFRKATSTARS-HVRSNWQMPVFCLLAFSLLA----VLSLYF 284

Query: 308 PELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGY 367
           PEL G G   +    N   G     +L   ++   L     GA GG+  P LA+G   G 
Sbjct: 285 PELPGNGKGPMQLALNDELGFPGAAMLLALKMVVILAVLRGGAEGGLLTPGLAVG---GM 341

Query: 368 AFGLIAKMWFPELNIEPG----MFAIAGMGALFAATVRAPITGILLVIEMTNNYHLIL-P 422
              L+  +W     + PG     FA+ G  A  AA+++ P+T + LV+E T+  H  L P
Sbjct: 342 TSLLLCMLW---QQLLPGGDCASFALVGAAAFLAASMQMPLTAVALVMEFTHMDHSYLAP 398

Query: 423 LIITSLGAVIFAQLL 437
            ++ + GA +  ++L
Sbjct: 399 TLLCAAGAFLTCRML 413