Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., voltage-gated chloride channel family protein from Ralstonia sp. UNC404CL21Col

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 100/381 (26%), Positives = 160/381 (41%), Gaps = 30/381 (7%)

Query: 34  LFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGYF 93
           L L  LVG+LAGL       A+   ++TR              WL  FL  A LA +G  
Sbjct: 21  LSLGALVGMLAGLGSAVLLLALDWATDTR----------IAHPWLLWFLPVAGLA-VG-- 67

Query: 94  LVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMG 153
           L++ +   A   G   +   +   + V   R+ P+   G +     G   GREG  VQMG
Sbjct: 68  LLYHYTGRAVEGGNNLLIDEIHDPKRVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMG 127

Query: 154 GAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMR-PQFRYTLIS 212
           G+    ++ +F +   D R  LL AG + G A+ F  PLAG +F +E +   + RY   +
Sbjct: 128 GSFADYLTRLFSLAPAD-RRILLMAGISAGFASVFGTPLAGAVFGLEVLAIGRLRYD--A 184

Query: 213 VRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLIT 272
           +    I+A+  ++V  ++        +P         +GL ++ G +FG+ G+ F  L  
Sbjct: 185 ILPCFIAAIVGDLVPPLLGVHHTPYAIPFVPHLTPIAIGLVVVAGIVFGLAGMTFAALTH 244

Query: 273 LAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILL 332
               +          R +L GS++      L L   +  G GI +I       +   +  
Sbjct: 245 RLSRVLKHRIAFGPLRPVLGGSVV--VAAALALGTDKYLGLGIPVIV----DAFHTPLPA 298

Query: 333 LLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGM 392
             F G+   T++   SG  GG   P+  +G   G A G +  + FP       + A  G 
Sbjct: 299 YDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLGNALGYVLPLPFP-------LLAGLGF 351

Query: 393 GALFAATVRAPITGILLVIEM 413
            A+FA     PI   L+ +E+
Sbjct: 352 VAVFAGAANTPIASTLMAMEL 372



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 52/212 (24%), Positives = 79/212 (37%), Gaps = 43/212 (20%)

Query: 12  LAKMPKDVINQFLSKDKTPFSVLF----------LSLLVGILAGLVGTYFEQAVHLVSET 61
           +A +  D++   L    TP+++ F          L ++ GI+ GL G  F    H +S  
Sbjct: 190 IAAIVGDLVPPLLGVHHTPYAIPFVPHLTPIAIGLVVVAGIVFGLAGMTFAALTHRLSRV 249

Query: 62  RTDWLKSEI--GSFLPLWLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRP 119
               LK  I  G   P+   + +++A LA            +  G GIP I  A      
Sbjct: 250 ----LKHRIAFGPLRPVLGGSVVVAAALAL--------GTDKYLGLGIPVIVDA------ 291

Query: 120 VRWWRVLPVKFFGGMGA-----LGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHS 174
             +   LP   F G  A     L SG   G   P   +G  +G  +  +  +        
Sbjct: 292 --FHTPLPAYDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLGNALGYVLPLP-----FP 344

Query: 175 LLAA-GAAGGLAAAFNAPLAGIMFVIEEMRPQ 205
           LLA  G     A A N P+A  +  +E   P+
Sbjct: 345 LLAGLGFVAVFAGAANTPIASTLMAMELFGPE 376



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 253 FLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTG 312
           +L LGAL G+   L + ++ LA D +    R      L    + G   GLL  Y      
Sbjct: 20  WLSLGALVGMLAGLGSAVLLLALD-WATDTRIAHPWLLWFLPVAGLAVGLLYHYTGRAVE 78

Query: 313 GGISLIPTITNGGYGA---GILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAF 369
           GG +L+    +         +  L+ +G + T L    +G  G             G +F
Sbjct: 79  GGNNLLIDEIHDPKRVVPKRMAPLILLGTVVTHLFGGSAGREG--------TAVQMGGSF 130

Query: 370 GLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTN----NYHLILPLII 425
                  F     +  +  +AG+ A FA+    P+ G +  +E+       Y  ILP  I
Sbjct: 131 ADYLTRLFSLAPADRRILLMAGISAGFASVFGTPLAGAVFGLEVLAIGRLRYDAILPCFI 190

Query: 426 TSLGAVIFAQLLG 438
            ++   +   LLG
Sbjct: 191 AAIVGDLVPPLLG 203