Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., chloride channel protein from Ralstonia sp. UNC404CL21Col

 Score =  116 bits (290), Expect = 2e-30
 Identities = 128/451 (28%), Positives = 191/451 (42%), Gaps = 92/451 (20%)

Query: 39  LVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGYFLVHRF 98
           L  +L GLV   + +A+ L  E     +          WL   +I+   A +  +L  RF
Sbjct: 27  LGAVLVGLVSVAYAKAIDLGFELFRGIVSHAF------WLP-IVITPLGAALAIWLTRRF 79

Query: 99  APEAAGSGIPEIEGAMDGMR---PVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMGGA 155
              A GSGIP++  A++  R    +   R++  K       +  G  +GREGPTVQ+G +
Sbjct: 80  FRGAEGSGIPQVIAALEDGRLSSSLLSLRIMFGKIVVSFLGILCGFTIGREGPTVQIGAS 139

Query: 156 VGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQF--RYTLISV 213
           +   +   +R  ++     L  AGAA GLAAAFN PLAG++F IEE+   F  R +   +
Sbjct: 140 LMYAMRRGYRRSSQHIERQLALAGAAAGLAAAFNTPLAGVVFAIEELTRSFVARNSGTLI 199

Query: 214 RAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGAL--FGVFGVLFNYLI 271
            A+I S V A                       L   G +L  G +   G F +    ++
Sbjct: 200 TAIIFSGVVA-----------------------LGLQGNYLYFGRIQAIGQFHLALVPVV 236

Query: 272 TLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPE-------------------LTG 312
             A  L                 ++GG F  LLL +P                    L G
Sbjct: 237 IGASALC---------------GVVGGVFCWLLLNIPRWMPARLVDIRQTQPVWFAFLCG 281

Query: 313 GGISLIPTITNG-----GY--GAGILLLLFVGRIFTTLLCFG-------SGAPGGIFAPM 358
             I+LI  ++ G     GY    G+L        F  +L FG       SG PGGIFAP 
Sbjct: 282 VAIALIGLVSGGTTFGSGYAEARGLLETHQALSPFYAVLKFGALIASYLSGIPGGIFAPS 341

Query: 359 LALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYH 418
           LA+G   G    L+     P     P + A+  +G L AA  ++PIT  ++V+EM + + 
Sbjct: 342 LAIGAGLGNVMSLVTSA-IP----LPSLAALCMVGYL-AAVTQSPITSFVIVMEMIDGHE 395

Query: 419 LILPLIITSLGAVIFAQLLGGQPIYSQLLHR 449
           ++LPL+  +L +   ++ L     Y  L HR
Sbjct: 396 MVLPLMAVALLSSQVSKAL-TPSFYHTLAHR 425