Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., voltage-gated chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  140 bits (354), Expect = 8e-38
 Identities = 131/426 (30%), Positives = 200/426 (46%), Gaps = 44/426 (10%)

Query: 35  FLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSF--LPLWLAAFLISAFLAFIGY 92
           F+S+ VG+L GL+   +   +      R D+  S    +  LPL+L   L+   L F+ +
Sbjct: 29  FVSIFVGLLTGLIAVPYHYLLQFFFNLRHDFFDSHPKWYWYLPLFL---LMWGILIFVSW 85

Query: 93  FLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPV-KFFGGMGALGSGMVLGREGPTVQ 151
            +  +  P   G GIP+  G ++G    +   +  + KF GG+ AL +G+ LGREGP+VQ
Sbjct: 86  LV--KKMPLITGGGIPQTRGVINGRVAYKHPFIEVIAKFVGGILALSTGLSLGREGPSVQ 143

Query: 152 MGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMR----PQFR 207
           +G  VG ++S   RV   + R  LLAAGA  GLAAAF APLA  + VIE +     P+  
Sbjct: 144 IGSYVGCLVSKWGRVLAGE-RKQLLAAGAGAGLAAAFAAPLASSLLVIESIERFDAPKTA 202

Query: 208 YTLISVRAVIISAVAA-----NIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGV 262
            T + +  V+   VA+     N  F++    DA++    +     S + LFLLL A+  V
Sbjct: 203 ITTL-LAGVVAGGVASWLFPINPYFQI----DAIVPGMTF----WSQVKLFLLLAAVVSV 253

Query: 263 FGVLFNYLITLAQDLF--VKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGG-----I 315
           FG  F+      + ++  +K     +  YLL  +       L+ +    LTGGG      
Sbjct: 254 FGKFFSVTTLQVKRIYPAIKHPEYVKMLYLLFIAY------LISMAEVNLTGGGEQFLLA 307

Query: 316 SLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKM 375
             +   T+  +  G++LL FV   F+    F SG PGG F P L  G L G    LI   
Sbjct: 308 QAMHPDTHILWIVGMMLLHFVFSTFS----FSSGLPGGSFIPTLVTGGLLGQIVALILVQ 363

Query: 376 WFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQ 435
                        +  M A   A +R P+T I+L+ E+T +  +  P I+       F +
Sbjct: 364 QGVIAYENISYIMLICMSAFLVAVIRTPLTAIVLITEITGHLEVFYPSIVVGGLTYYFTE 423

Query: 436 LLGGQP 441
           +L  +P
Sbjct: 424 MLQIKP 429