Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  148 bits (374), Expect = 4e-40
 Identities = 117/434 (26%), Positives = 197/434 (45%), Gaps = 32/434 (7%)

Query: 33  VLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGY 92
           +L LS LVGI   +   + +  +H +    T+   +   ++L  +L   +I  FLA  G+
Sbjct: 27  ILILSFLVGIFTAIAALFLKFLIHQIQNFLTNNFNATSANYL--YLVYPVIGIFLA--GW 82

Query: 93  FLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQM 152
           F V     +    G+ +I  A+   +       +          +G G  +G E P V  
Sbjct: 83  F-VRNIVKDDISHGVTKILYAISRRQGRIKRHNIWSSTIASAITIGFGGSVGAEAPIVLT 141

Query: 153 GGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLIS 212
           G A+G  +  +F++++  T   L+  GAAG +A  F AP+AG++F +E +      T+ S
Sbjct: 142 GSAIGSNLGSVFKMEHR-TLMLLVGCGAAGAIAGIFKAPIAGLVFTLEVL--MIDLTMSS 198

Query: 213 VRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLIT 272
           +  ++ISAV A  V  +  G +A+       A EL  +   +LLG   G+  + F   + 
Sbjct: 199 LLPLLISAVTAATVSYITTGTEAMFKFNLDQAFELERIPYVILLGIFCGLISLYFTRAMN 258

Query: 273 LAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNG-------- 324
             + +F K  +N  ++    G M+     +L+   P L G G   I  + NG        
Sbjct: 259 SIEGVFGKL-KNPYQKLAFGGVMLS----VLIFLFPPLYGEGYDTIELLLNGTSAAEWDT 313

Query: 325 --------GYGAGI---LLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIA 373
                   GYG  +   L+L+ + ++F +    G G  GGIFAP L LG + G+ F   +
Sbjct: 314 VMNNSMFYGYGNLLQVYLMLIILLKVFASSATNGGGGCGGIFAPSLYLGCIAGFVFSHFS 373

Query: 374 KMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIF 433
             +     +    FA+ GM  + +  + AP+TG+ L+ E+T  Y L LPL+I S+ + + 
Sbjct: 374 NDFAFSAYLPEKNFALMGMAGVMSGVMHAPLTGVFLIAELTGGYDLFLPLMIVSVSSYLT 433

Query: 434 AQLLGGQPIYSQLL 447
                   IYS  L
Sbjct: 434 IIAFEPHSIYSMRL 447