Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  121 bits (303), Expect = 5e-32
 Identities = 114/388 (29%), Positives = 183/388 (47%), Gaps = 30/388 (7%)

Query: 77  WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFG---- 132
           WL   L++  ++ I  +L  RF P + GSGIP++   +     +    + P    G    
Sbjct: 59  WLP-LLVTPAISAICVWLTLRFFPGSEGSGIPQVIATLHDRGGIGERLLTPGILLGKILV 117

Query: 133 GMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTR-----HSLLAAGAAGGLAAA 187
              A+  G  +GREGPT+ +G A+   +   +  +    R       L  AGAA GL+AA
Sbjct: 118 SFLAMLGGFTIGREGPTIHVGAALMFNLRSFYPKRFRAMRGGALERRLALAGAAAGLSAA 177

Query: 188 FNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDA--P 245
           FNAPLAG++F IEE+   F      V  +I + + A IV   I G              P
Sbjct: 178 FNAPLAGVVFAIEELTRSFEQRTSGV--LITAIIFAGIVSLGIQGNYTYFGTIDIGTGFP 235

Query: 246 ELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRK-RYLLTGSMIGGCFGLLL 304
           +L  + + +L+G + G  G +F +L+   +        + R  R +L G+   GC GL++
Sbjct: 236 DLLAVAV-VLIGVVAGSAGGIFCWLLLNTRRWMPSIILDCRSHRPILFGA---GC-GLVI 290

Query: 305 LYVPELTGG---GISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLAL 361
             +   +GG   G   +         A + +L  V ++ + +  +  GAPGG+FAP LA+
Sbjct: 291 AAIGVFSGGHTFGSGYVEARDMLDGRAHLTILYPVLKMASMIGSYLPGAPGGLFAPSLAI 350

Query: 362 GTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLIL 421
           G   G A  L+    F ++ +   M    GM    AA  ++PIT  ++VIEM N + L++
Sbjct: 351 GAGIGNALHLV----FSQMQLP--MLIALGMVGYLAAVTQSPITSFVIVIEMINGHALVI 404

Query: 422 PLIITSLGAVIFAQLLGGQPIYSQLLHR 449
            L+ T+L A   ++L    P+Y  L  R
Sbjct: 405 SLMATALIASQVSRLF-APPLYEALSER 431