Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., voltage-gated chloride channel protein ClcB from Burkholderia phytofirmans PsJN

 Score =  167 bits (423), Expect = 9e-46
 Identities = 137/461 (29%), Positives = 213/461 (46%), Gaps = 36/461 (7%)

Query: 9   ISLLAKMPKDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKS 68
           +S L K+     N F   D    ++L  S++VG+        F +A+ L+       +  
Sbjct: 2   LSFLLKLRTRAQNLFRLSDA--HTMLIWSVVVGVAGAFATIAFREAIALLQFA----IVG 55

Query: 69  EIGSFLPL----------WLAAF--LISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDG 116
           + GSF+ +          WL A   LI+ FL  I      R+  +       E     DG
Sbjct: 56  KSGSFVEMARGLPWTVRIWLPAAGGLIAGFLLLIA----RRYEDKCNHIDYMEAVAIGDG 111

Query: 117 MRPVR--WWRVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHS 174
           + PV+   WR +   F      + SG  +GREGP VQ+    G +I           R  
Sbjct: 112 VVPVKLSMWRSVSSLF-----TISSGGSIGREGPMVQLAALAGSLIGRWVHFDPPRLR-L 165

Query: 175 LLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQD 234
           L+A GAA G+ +A++AP+AG  FV E +       + S   V++SAV ANI  R   G  
Sbjct: 166 LVACGAAAGITSAYSAPIAGAFFVTEIVLGSI--AMESFGPVVVSAVVANITMREFAGYK 223

Query: 235 AVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGS 294
               MP +       + LF+ LGAL G     F  L+ L++  F K       R  L G 
Sbjct: 224 PPYEMPVFPPVAGLEVLLFVALGALCGAAAPQFLRLLDLSKQSFRKLPVPLPVRLALGGL 283

Query: 295 MIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGI 354
           ++G    +L ++ PE+ G G S++  I +  +    L+L+ V +I  T    GSGA GG+
Sbjct: 284 VVG----ILSVWTPEVWGNGYSVVNAILHSPWTWTALVLVLVFKIVATAATAGSGAVGGV 339

Query: 355 FAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMT 414
           F P L +G + G  FG      +P     P  +A+ GMGA  A   +AP+  IL++ EMT
Sbjct: 340 FTPTLFVGAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMT 399

Query: 415 NNYHLILPLIITSLGAVIFAQLLGGQPIYSQLLHRTLKNQK 455
            +Y ++LPL+++ + A   ++ +G   +Y   L R  + Q+
Sbjct: 400 LSYQVVLPLMLSCVVAYFVSRAIGKNSMYEITLRRNHEEQE 440