Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  102 bits (254), Expect = 3e-26
 Identities = 105/430 (24%), Positives = 191/430 (44%), Gaps = 31/430 (7%)

Query: 17  KDVINQFLSKDKTPFSVLF-LSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEI---GS 72
           K   ++ + ++ +PF+V+  ++LL G+ AGL G      +H +      +  + +    S
Sbjct: 4   KSTTSEPVRREHSPFAVVAAVTLLTGLGAGLGGMLLALLLHGIQHLAYGYSVTHVISAES 63

Query: 73  FLPLWLAA--------FLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWR 124
           FL    AA          I   +A  G++ ++RF     G  +  I  A+    P     
Sbjct: 64  FLQGVSAAAPERRLLVLTICGLIAGFGWWALYRF-----GRPLVSIRQAVKSDDPQMPVM 118

Query: 125 VLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGL 184
              +     +  +  G  LGRE    ++G A+   +S    +    +R  ++A GA  GL
Sbjct: 119 STTIHAVLQIVTVALGSPLGREVAPREIGSALAGWLSRRAGLSAAQSR-IMVACGAGAGL 177

Query: 185 AAAFNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDA 244
           AA +N PL G +FV+E +   F +  + V A++ S+VAA +    +  +   +      +
Sbjct: 178 AAVYNVPLGGAVFVLEVLLGTFGWPAL-VPAIVTSSVAALVAQLGLGNEHQYLVASMTLS 236

Query: 245 PELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIG-GCFGLL 303
           P L    +  + G +FGV    F  L+  ++    K  R      L   S++     G+ 
Sbjct: 237 PALVVWSV--VCGPIFGVAAWSFAELMKRSRAAAPKNWR------LPVLSLLNFATIGVF 288

Query: 304 LLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGT 363
            ++ P+L G G        +GG    +  +L V ++  T     +GA GG+  P LA G 
Sbjct: 289 AMHFPQLLGNGKGPAGLAFDGGLTISLAAMLLVLKVVITASSLRAGAEGGLLTPGLANGA 348

Query: 364 LFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTN-NYHLILP 422
           L     G +  + +P  ++  G FA+ G  A  AA+++ PIT ++L+ E T  +   ++P
Sbjct: 349 LLAIVLGGLWSLAWPGASL--GAFAVVGATAFLAASMQMPITAVVLMFEFTRVSQDFLIP 406

Query: 423 LIITSLGAVI 432
           ++    GA++
Sbjct: 407 VLFAMGGALL 416



 Score = 31.6 bits (70), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 391 GMGALFAATVRAPITGILLVIEM---TNNYHLILPLIITSLGAVIFAQL-LGGQPIY 443
           G GA  AA    P+ G + V+E+   T  +  ++P I+TS  A + AQL LG +  Y
Sbjct: 172 GAGAGLAAVYNVPLGGAVFVLEVLLGTFGWPALVPAIVTSSVAALVAQLGLGNEHQY 228