Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  124 bits (312), Expect = 5e-33
 Identities = 109/383 (28%), Positives = 178/383 (46%), Gaps = 27/383 (7%)

Query: 79  AAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALG 138
           A  +I+  +  +  +L  +F   A GSGIP++   +         R+L  +   G  A+ 
Sbjct: 61  APLIITPAVTALAVWLTRKFFRGAEGSGIPQVIATLHSRTSAYGSRLLTFRILFGKIAVS 120

Query: 139 -----SGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLA 193
                 G+ +GREGPTVQ+G A+   +  ++   N      L+ AGAA GL+AAFN PLA
Sbjct: 121 FLAILGGLTIGREGPTVQVGAALMFNLRRLYPRSNALIERQLVLAGAAAGLSAAFNTPLA 180

Query: 194 GIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLF 253
           GI+F IEE+   F      V  +I + + A ++   +NG        Q  A   + L L 
Sbjct: 181 GIVFAIEELTRSFEARASGV--LITAIIIAGVIALGLNGNYTYFGTIQIGAHFPNVLALA 238

Query: 254 LLLGALF-----GVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCF-GLLLLYV 307
           +LL A+      GVFG L   L+  A+ +     +   +R +   ++ G    G+ L+  
Sbjct: 239 VLLTAVVTGLAGGVFGWL---LLNTARWIPAPLRQLHSERPVAFAALCGFVIAGVGLISG 295

Query: 308 PELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFG- 366
               G G +    + +G     +       ++ + +  +  G PGGIFAP L++G  FG 
Sbjct: 296 GTTFGSGYAEARGLLDGHAQLSVFYPFL--KMISMVGSYLPGIPGGIFAPSLSIGAGFGD 353

Query: 367 YAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIIT 426
             + +   M  P       M    GM    AA  ++PIT  ++V+EM N + L++ L+ T
Sbjct: 354 LLYRVFQSMDLP-------MLIALGMVGYLAAVTQSPITSFVIVMEMINGHALVISLMAT 406

Query: 427 SLGAVIFAQLLGGQPIYSQLLHR 449
           +L +   ++LL   P+Y  L  R
Sbjct: 407 ALISSRVSRLL-TPPLYESLAER 428