Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  106 bits (265), Expect = 2e-27
 Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 23/361 (6%)

Query: 94  LVHRFAPEAA-GSGIPE-IEGAMDG---MRPVRWWRVLPVKFFGGMGALGSGMVLGREGP 148
           L+ R+  E   G GIPE IE  + G   M P    +V  +K       +GSG   G EGP
Sbjct: 82  LMARYGSEKIRGHGIPEAIEAILFGKSRMSP----KVAILKPLSSGIVIGSGGPFGAEGP 137

Query: 149 TVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRY 208
            +  GGA+G +I+   +V   + R +LL AGAA G+ A F  P+A ++  +E +   F +
Sbjct: 138 IIMTGGALGSLIAQCVKVTAAE-RKTLLVAGAAAGMTAVFGTPVAAVLLAVELL--LFEW 194

Query: 209 TLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFN 268
              S   V ++   A        G   +  +       LS L   ++ G L G      +
Sbjct: 195 RPRSFLPVALACAVAGFARAAFFGTGPLFPLETAPPGALSLLSC-VVAGLLSGALASGLS 253

Query: 269 YLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGA 328
             +   +DLF K   +    +   G ++ G  G L    P   G G  +I  + +     
Sbjct: 254 AALYKVEDLFGKLPIH-WMWWPALGGLVVGIGGFL---EPRALGVGYDVIGDLLHQHIAI 309

Query: 329 GILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFA 388
            I L + + +    ++  GSG  GG+ AP+L LG   G   G +          EP ++ 
Sbjct: 310 QIALAILIVKAVIWVVALGSGTSGGVLAPLLMLGAGLGVLLGHVLP------GGEPALWP 363

Query: 389 IAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQLLGGQPIYSQLLH 448
           +  M A   AT+ AP+T I+    +T++ + +LPL+  +L A  FA ++  + I ++ + 
Sbjct: 364 LVCMAATLGATLGAPLTAIVFAFGLTHDSNALLPLLAATLIAHGFATVVMKRSIMTEKIA 423

Query: 449 R 449
           R
Sbjct: 424 R 424