Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  107 bits (266), Expect = 3e-27
 Identities = 134/533 (25%), Positives = 220/533 (41%), Gaps = 59/533 (11%)

Query: 184 IAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDY-SLDAQELDLLHQILNEA 242
           I   F A ++HE+R PL+ +   +   + +     T    DY     +  D L  I+NE 
Sbjct: 283 IKSEFLANMSHEIRTPLNGI---LGFTQLLQKSDLTPRQQDYLGTIEKSADSLLGIINEI 339

Query: 243 DDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEV- 301
            D  +S   A  L+L SI  N           + D+IE  +       A   H+ +LE+ 
Sbjct: 340 LD--FSKIEAGKLVLDSIPFN-----------LRDLIEDTLTIL----APAAHTKQLELV 382

Query: 302 -----HQPFDFFGSDTLLTYALFNLLKNAFYYQKEH-FSVCISIEQTSEHNL---IRVRD 352
                  P    G    L   L NL+ NA  +  E   +V   +E  +       I V+D
Sbjct: 383 SLVYRDTPLSLVGDPLRLKQVLTNLISNAIKFTNEGTIAVRAMVEDDNADRAQLRISVQD 442

Query: 353 NGVGIAPEMLEDIFRDFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTE 407
            G+G+  + L  +F+ F     +     G  GLGL   ++++   GG I   S   + +E
Sbjct: 443 TGIGLTDQDLRALFQAFSQADNSMSRQPGGTGLGLVISKRLIEQMGGEIGVDSIPDEGSE 502

Query: 408 F--VLSFPRYDSDTVNEIKTELLKTKSLIYIGSN----QAIVRELNQLAVEDEFGFTAIS 461
           F   LS P+   D V ++    L+ + +  +  +    QA+  +L  L +E     T   
Sbjct: 503 FWISLSLPKARDD-VEDLPHPALQGRRIALLEQHPLARQALQHQLESLGLEVHTFDTLDQ 561

Query: 462 AQQAVRRQDYEFEF-DLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYA--- 517
            Q A+  Q    +  DL +L +     Q E L +    +  A GC   V  P        
Sbjct: 562 MQAAIGAQRQSSQLIDLAVLGVTAREIQPEALSRRLMEIE-ALGCKCVVLCPTTEQGHYH 620

Query: 518 ---VNINRYLRIQPISIHSILRKPRKIIERLLFEQESLSMNRNVIPLQKSRHERRILVVD 574
                ++ Y ++Q     +  RK ++++  L+   ++ +      P + +R    +L VD
Sbjct: 621 DTLPEVHSYTQLQ--GKPACTRKLQRVLVELVRPNQTYAAPVAAAPSRAAR----VLCVD 674

Query: 575 DNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIR 634
           DN +       LL   G EVV  ++G   L  ++  + DLVLMD++MP + G + T  IR
Sbjct: 675 DNPANLLLVKTLLGDMGAEVVAVDNGPAALDAVKQHSFDLVLMDVQMPGMDGRQTTEAIR 734

Query: 635 NSEHEYKN--IPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAW 685
           + EH   +  +PII  T          +  SGM+D++ KP     L   V  W
Sbjct: 735 HWEHTSGSTPLPIIALTAHALANEKRSLLQSGMDDYLTKPISDRQLAQVVLKW 787