Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score = 87.4 bits (215), Expect = 3e-21
 Identities = 126/549 (22%), Positives = 224/549 (40%), Gaps = 58/549 (10%)

Query: 173 RNQISHETKVSIAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQEL 232
           R+Q +   +++    F A I+HE+R P++ +   + +   ++  P +    DY      +
Sbjct: 385 RDQAASTAEINAKAEFLAKISHEIRTPMNGV---LGMTELLLGTPLSVKQRDY------V 435

Query: 233 DLLHQILNEADDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAA 292
             +H   NE   +I   N  +D+      +  +    F    +  ++E  +  F  K  A
Sbjct: 436 QTIHSAGNELLTLI---NEILDITKLESGQIELDDVQF---DIGALVEDCLNIFRAK--A 487

Query: 293 DQHSVEL----EVHQPFDFFGSDTLLTYALFNLLKNAFYYQKE-HFSVCISIEQTSEHNL 347
           +Q  VEL    +   P    G  T L   L +LL+NA     E    + +S+E +   N 
Sbjct: 488 EQQQVELISQIQPQVPRVINGDPTRLRQTLLSLLENALKKTDEGEILLAVSLESSKSGNT 547

Query: 348 ---IRVRDNGVGIAPEMLEDIF------RDFYTFGKNGSYGLGLPFCRKVMSAFGGTIRC 398
              I V+D+G  ++ E  E++       R+F    + G + LGL   R+++    G    
Sbjct: 548 RLRISVQDSGESLSDEEREELLHAELHSRNFLASSRLGGH-LGLVIARQLIVLMDGEFGI 606

Query: 399 ASQQGQWTEFVLSFPRYDSDTVNEIKTEL---LKTKSLIYIGSNQAIVRELNQLAVEDEF 455
            +   Q     L+ P  D+  + +   +L   LK   ++ +  N    + L Q       
Sbjct: 607 QNTGAQGNTLWLNLP-LDAKLLEQPTIDLDSPLKDARVLVVDDNDTCRKVLVQQCSAWGL 665

Query: 456 GFTAISA--------QQAVRRQDYEFEFDLILLDLDDATAQG-ELLPKLEGTLSFAEGCI 506
             +A+++        +     +DY   FD++LLD +     G +L  K++   S     +
Sbjct: 666 NVSAVASGKEALALLRTKAHLRDY---FDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDIL 722

Query: 507 -----GYVYDPGKTYAVN--INRYLRIQPISIHSILRKPRKIIERLLFEQESLSMNRNVI 559
                G    P K  A N  I R L  +P++ +++       + +L     S      V 
Sbjct: 723 LIMLTGISNAPSKIIARNSGIKRILA-KPVAGYTLKTTLADELTQLNKGVVSNKPGPVVT 781

Query: 560 PLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDI 619
           P      + RILV +DN         +L +       A++G E L+ M++Q  DLVLMD 
Sbjct: 782 PPVNVPGDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALRAMKAQRYDLVLMDC 841

Query: 620 EMPNVGGLEATRLIRNSE--HEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDV 677
           EMP + G  AT  +R  E  ++    P++  T     +     + +GM+  + KP +   
Sbjct: 842 EMPILDGFSATEQLRAWEVGNQRVRTPVVALTAHILTEHKDRARQAGMDGHMAKPIELSQ 901

Query: 678 LLNKVAAWV 686
           L   V  WV
Sbjct: 902 LRELVEHWV 910