Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (284), Expect = 5e-29
 Identities = 131/520 (25%), Positives = 222/520 (42%), Gaps = 58/520 (11%)

Query: 188  FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
            F A ++HE+R P++A+          I   Q    T  SLD ++ + + +I   +  ++ 
Sbjct: 1043 FLANMSHEIRTPMNAI----------IGMSQLCLQT--SLDKKQQNYVEKIDRASKSLLG 1090

Query: 248  SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEV--HQPF 305
              N+ +D       +  +    F+  ++   +E     F  K A  Q  +   V  + P 
Sbjct: 1091 IINDILDFSKIEAGKLDIEAVPFQLDTM---LEDLSDMFSVKAADKQLELLFAVAPNIPR 1147

Query: 306  DFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQT---SEHNLIR--VRDNGVGIAPE 360
               G    L+  L NL+ NA  +  E   V +SI Q     E  L++  VRDNG+G+  E
Sbjct: 1148 HLVGDPLRLSQVLINLMNNAIKFT-EQGEVMLSISQLVREDEEILLKFSVRDNGIGLTEE 1206

Query: 361  MLEDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRY 415
                +F+ F      T  K G  GLGL  C++++   GG I   SQ G  + F  S  R+
Sbjct: 1207 QRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFFFSV-RF 1265

Query: 416  DSDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAISAQQAVRRQD--YEF 473
                   IK         I +  + A  R++ +  +E   GFT  + +          E 
Sbjct: 1266 KVADNQLIKVAQELEGMRILVADDNATARDILRSTLES-MGFTVDTVRSGAEALSRCQET 1324

Query: 474  EFDLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNINR----YLRIQPI 529
            ++ + L+D          +P+++G L  A   +    +P KT  V+ +       + +  
Sbjct: 1325 DYGVALIDWR--------MPEMDG-LETARRLLSERTNPPKTLIVSAHADGDFIDKAEQA 1375

Query: 530  SIHSILRKPRKIIERLLFEQESLSMNRNVIPLQKSRHE-----------RRILVVDDNQS 578
             I   + KP     RLL    S    +  +P+++   E           +RIL+V+DN+ 
Sbjct: 1376 EISGYITKPISA-SRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKGKRILLVEDNEM 1434

Query: 579  IRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSEH 638
             +   +  LEQ G  +  A +G   L+ +  Q+ DLVLMD +MP + G +AT  +R    
Sbjct: 1435 NQEVASEFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELR-KRP 1493

Query: 639  EYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVL 678
            E  ++P+I  T +       +   +GMND I KP +  +L
Sbjct: 1494 ELADLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLL 1533