Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 78.2 bits (191), Expect = 1e-18
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 569 RILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLE 628
           RILV +D+     F    L++QGYEV    DGSEV+  +  Q  DLVLMDI MP + G+E
Sbjct: 432 RILVAEDHPMNLMFIEKFLQKQGYEVQSVTDGSEVVPALRKQEFDLVLMDIAMPVMDGME 491

Query: 629 ATRLIRNSE--HEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVL 678
           ATR++R ++       +PII  T             +GM+D+I KP + D L
Sbjct: 492 ATRMVRKAQGMATSSGVPIIAMTAHAMKGDREQFLAAGMDDYIGKPINSDNL 543



 Score = 49.7 bits (117), Expect = 4e-10
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 34/236 (14%)

Query: 188 FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
           F A ++HE+R P++ +   +D+              D  LD ++ + L    N A+ ++ 
Sbjct: 185 FLASMSHEIRTPMNGVLGMLDLA------------LDTPLDEEQREYLEAAQNSAESLLA 232

Query: 248 SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFP--YKNAADQHSVELEV---- 301
             N+ +D        +++     +  S V  + K + T    + + A++  +        
Sbjct: 233 LINDILDF-------SKIEAGMVELDSQVFRLRKRLSTLHTMFVHRAEEKGLGFAFLVPE 285

Query: 302 HQPFDFFGSDTLLTYALFNLLKNAFYYQKE-HFSVCI-SIEQTSEHNLIR--VRDNGVGI 357
             P    G    L   L NLL NA  + +    S+ + +++ T E  L+   V D+G GI
Sbjct: 286 GVPDGLVGDPMRLRQVLVNLLDNALKFTEAGRVSLAVRTVQATPESMLLEFSVTDSGPGI 345

Query: 358 APEMLEDIFRDFYTFG-----KNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEF 408
             +  E IF  F         ++   GLGL  C+++    GG IR  S  GQ + F
Sbjct: 346 LDKHREHIFERFVQADGSLSRRHKGTGLGLAICKRLALLMGGDIRVDSAPGQGSTF 401