Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 935 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella oneidensis MR-1

 Score = 99.4 bits (246), Expect = 7e-25
 Identities = 113/524 (21%), Positives = 221/524 (42%), Gaps = 45/524 (8%)

Query: 184 IAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEAD 243
           I   F A ++HE+R PL+ +   I   R ++  P         L + ++D ++ I   A 
Sbjct: 300 IKSEFLANMSHELRTPLNGV---IGFARQLVKTP---------LHSSQVDYINTIERSAT 347

Query: 244 DVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEV-- 301
           +++   N+ +D       +  +    F     +      +       +A    +EL V  
Sbjct: 348 NLLAIINDILDFSKLEAGKMVLESMPFGLRETLGETITLIS-----GSAQAKGLELVVDI 402

Query: 302 --HQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIE---QTSEHNLIR--VRDNG 354
             + P +  G    +   + NL+ NA  +  +  SV + +E   QT E  ++R  V D G
Sbjct: 403 APNVPDNVNGDSMRVCQIINNLVGNAIKFT-DSGSVLVKLELQAQTDEQVVLRCDVIDTG 461

Query: 355 VGIAPEMLEDIFRDFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFV 409
           +GI     + +F+ F     +     G  GLGL   +++++  GG I   S   + + F 
Sbjct: 462 IGIDESQQDFLFQAFGQADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFW 521

Query: 410 LSFPRY--DSDTVNEIKTELLKTKSLIY----IGSNQAIVRELNQLAVEDEFGFTAISAQ 463
            + P         + +  E L+ K++++    + ++  I R+L Q   +        S Q
Sbjct: 522 FTLPLGLGQFQIGDSLPLEKLQNKTVLFYEPRVLTHSVISRQLKQWDTKVTHHQHIPSLQ 581

Query: 464 QAVRRQDYEFEFDLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNINRY 523
             +   +++F++  +LL          L+  L    +  + C+  ++D  +     ++++
Sbjct: 582 TTLSTTEHQFDY--VLLSCHGFNNPNHLVSTLIQAKAKTD-CLIVLFDCQEQDM--LSQF 636

Query: 524 LRIQPISIHSILRKPRKIIERLLFEQESLSMNRNV-IPLQKSRHERRILVVDDNQSIRTF 582
           +R     + S+     ++   +L+      +   V I +  +R    +L VDDN +    
Sbjct: 637 IRPNADVVLSLPVSEHQLARNMLYPPMEYDLLPPVSIAVPAARQSLTVLAVDDNFANLKL 696

Query: 583 TAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSEHEYKN 642
              LL +    V+  N G E +K  +++  DL+ MDI+MP   G+ AT+ IR      +N
Sbjct: 697 IDTLLNELVTTVIAVNSGEEAVKQAKTRTFDLIFMDIQMPGTDGISATKQIRQGSMN-RN 755

Query: 643 IPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAWV 686
            PII  T     +   L+  SGM+ ++ KP D   L  ++  W+
Sbjct: 756 TPIIAVTAHAIAEERELILGSGMDGYLPKPIDEAALKAEINRWI 799