Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., sensor histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 75.5 bits (184), Expect = 8e-18
 Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 2/106 (1%)

Query: 569 RILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLE 628
           R+LVVDD+ + RT T  +L ++G+    A+DG+  L+ + +   DLVL+D++M  +GGLE
Sbjct: 410 RVLVVDDDATGRTITCKMLRKRGHVCACAHDGATALQRLTADRFDLVLLDVKMHPMGGLE 469

Query: 629 ATRLIRNSEHE--YKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKP 672
             R IRN+++    +NIP++  T             SGM D+I KP
Sbjct: 470 LLRRIRNAQYPGVDRNIPVVAVTAHALKGDRERFLASGMTDYIAKP 515



 Score = 65.5 bits (158), Expect = 8e-15
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 39/250 (15%)

Query: 183 SIAKT-FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNE 241
           S+AKT F AG++HE+RN L+ +    ++V             D  L  ++ + L+ +L  
Sbjct: 139 SLAKTSFLAGMSHEIRNTLNGIVGMTELV------------LDTPLSGEQRESLNTVLAS 186

Query: 242 ADDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVV-DVIEKAVKTFPYKNAADQHSVELE 300
           ++ ++   ++ +D       + R+    F    ++  V++ +      KN +    V  +
Sbjct: 187 SETLLTLLHDVLDFSRLEARQLRLVERPFSLDRLLKQVVQASRSEAERKNISLDFRVTPD 246

Query: 301 VHQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHN-------------- 346
           V  P    G  T LT  L NL+ NA  +  +  SV I +    +                
Sbjct: 247 V--PDRLTGDATRLTQVLANLVGNAVKFTHKG-SVIIEVSAIPQDQTLLESLFPDGPPSS 303

Query: 347 ---LIRVRDNGVGIAPEMLEDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRC 398
              L  +RD G+GIA E L  IF  F      T  + G  GLGL  CR ++   GG+I  
Sbjct: 304 LTLLFSIRDTGIGIADEHLRTIFEAFSQGAEETVQRYGGTGLGLAICRNLVEIMGGSIWA 363

Query: 399 ASQQGQWTEF 408
            S +GQ + F
Sbjct: 364 RSSEGQGSSF 373



 Score = 47.0 bits (110), Expect = 3e-09
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 569 RILVVDDNQSIRTFTAILLEQQGYEVVQAN-DGSEVLKHMESQNIDLVLMDIEMPNVGGL 627
           RI+VVDD Q +       LE  GY V     D    +   +    DLVLMDI +    G+
Sbjct: 5   RIIVVDDEQIVALDLRRTLEGLGYIVPAVETDADGAIDAAKRLRPDLVLMDIRLRRGDGV 64

Query: 628 EATRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKP-ADRDV 677
           +A  +I N      +IP++  T  +   TL+    +G   F+VKP A+R++
Sbjct: 65  DAAHVITNQ----FDIPVVFLTAFSDEATLSRAMKAGPFGFLVKPFAEREL 111