Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 902 a.a., Signal transduction histidine kinase from Paraburkholderia bryophila 376MFSha3.1

 Score =  231 bits (588), Expect = 1e-64
 Identities = 186/695 (26%), Positives = 321/695 (46%), Gaps = 37/695 (5%)

Query: 1   MIVSMDVIKRVYQYAEPNLSLVGWMGMLGFPAYYFIWEYWFPQSYENLGLRCAAAVLFGG 60
           M++  + ++ V + +   +   G +G++  P YY +W Y  PQ Y+NL LR +AA++   
Sbjct: 1   MLIPRESMQDVLERSRFAIRWGGALGLVCHPVYYLVWTYILPQPYDNLPLRLSAALICVP 60

Query: 61  LVFRDSMPKKWQRYMPGYFLFTIGFCLPFFFAFMMLMNDWSTIWAMSFMASIFLHILLVH 120
           L+F+   PK++ +Y+  Y+   + + LPF   F+ + N +ST+W M+ +  IF+  L + 
Sbjct: 61  LIFQARWPKRFNQYLLIYWHLCLIYVLPFVCTFLAIRNSFSTMWMMTEVMMIFIMALCID 120

Query: 121 DTRVM----ALQALFSVLVAYLAVYGLTDFHPTTLIEWQYIPIFLFTYVFGNLCFFRNQI 176
           +  ++     +  L   L A  +             +   +P+ +   +  +    + +I
Sbjct: 121 NPFLLMGCIGIGMLSGGLAAVASSPAPIVLSTANQSDLAVLPVVVLCSMAFSHAISKGRI 180

Query: 177 SHETKVSIAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLH 236
             E   ++    G+ IAHEMRNPLS LK  +D V   +P             A    LL+
Sbjct: 181 FVEKNRALQALAGS-IAHEMRNPLSQLKHVLDRVEETLPALTEHGRAPAPSGAGAA-LLY 238

Query: 237 QILNEADDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHS 296
           + L      I  G   I + L  +   ++   S    S      KA+  + + +  ++  
Sbjct: 239 RHLAHGQLSIERGLRVIAMTLDEVSAKQIRSDSLTYLSAGATTRKALDEYGFADRKERGK 298

Query: 297 VELEVHQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLIRVRDNGVG 356
           V L V + F F   +T+  + LFNL+KNA ++     S  +++  T + + + VRD G G
Sbjct: 299 VRLAVLEDFTFKVDETVYLFTLFNLIKNALHHIAPLPSATLTL--TVDRHCVSVRDTGSG 356

Query: 357 IAPEMLEDIFRDFYTFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYD 416
           IAPE+L  +F  F T G +   GLGL +C++ M AFGG+I C S+ G++T+F L FP   
Sbjct: 357 IAPEILPHLFEPFRTAGNSAGTGLGLAYCQRAMRAFGGSIACRSELGKFTQFTLQFPPVT 416

Query: 417 SDTVN-------EIKTELLKTKSLIYIGSNQAI----VRELNQLAVEDEFGFTAISAQQA 465
              V        E  T +L  K ++    + A+     R L ++  E        +A   
Sbjct: 417 ESEVAAHERAIVERATGVLNGKRILLADDDAALRARTRRTLAKVGAEVSEAENGAAALAM 476

Query: 466 VRRQDYEFEFDLILLDLD----DATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNIN 521
           +R       +DL+L+D++    D  +  E L       ++      Y  +PG     NI 
Sbjct: 477 LREAS---AYDLVLMDVNMPVLDGYSATEQLRADRDHPNWNVLVAAYTSEPG-----NIA 528

Query: 522 RYLRIQPISIHSILRKPRKIIERLLFEQESLSMNRNVIPLQKSRHE---RRILVVDDNQS 578
           R L  +   +  ++ K    +E L    ++L  N N   L +   +   + ILV DD+  
Sbjct: 529 RVL-ARRAGMDDMISKSSSAME-LFTSLQALFENGNRRHLNQRFDDFSGKSILVADDDNY 586

Query: 579 IRTFTAILLEQQGYEVVQANDGSEVLKHMESQ-NIDLVLMDIEMPNVGGLEATRLIRNSE 637
            R      LE+ G  VV+A  G  VL  ++ +  ID +++D+ MP +GGLE    IR   
Sbjct: 587 SRLVAKAYLERFGASVVEAEHGQAVLDRLDEEVVIDAIVVDMNMPGMGGLETAAAIRART 646

Query: 638 HEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKP 672
             Y ++PII  T  +   ++    + GMN+ ++KP
Sbjct: 647 DGYASVPIIALTSQSDIGSVQACISVGMNEVMIKP 681



 Score = 62.4 bits (150), Expect = 9e-14
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 568 RRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHM-ESQNIDLVLMDIEMPNVGG 626
           +RIL+ DD+ ++R  T   L + G EV +A +G+  L  + E+   DLVLMD+ MP + G
Sbjct: 438 KRILLADDDAALRARTRRTLAKVGAEVSEAENGAAALAMLREASAYDLVLMDVNMPVLDG 497

Query: 627 LEATRLIR-NSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAA 684
             AT  +R + +H   N+ +  YT +       L + +GM+D I K +    L   + A
Sbjct: 498 YSATEQLRADRDHPNWNVLVAAYTSEPGNIARVLARRAGMDDMISKSSSAMELFTSLQA 556