Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  109 bits (273), Expect = 1e-27
 Identities = 128/522 (24%), Positives = 228/522 (43%), Gaps = 62/522 (11%)

Query: 188  FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
            F A ++HE+R P++A+          I   Q    T  +LD ++ + + +I   +  ++ 
Sbjct: 1043 FLANMSHEIRTPMNAI----------IGMSQLCLQT--ALDKKQKNYVEKIERASKSLLS 1090

Query: 248  SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEV--HQPF 305
              N+ +D       +  +    F+  ++   +E     F  K A  Q  +   V  + P 
Sbjct: 1091 IINDILDFSKIEAGKLDIESVPFQLDTM---LEDLSDMFSEKAAHKQLELLFAVAPNVPR 1147

Query: 306  DFFGSDTLLTYALFNLLKNAFYYQKEHFSVCIS---IEQTSEHNLIR--VRDNGVGIAPE 360
              FG    L   L NL+ NA  +  E   V +S   +EQ ++  ++R  VRD+G+G+  +
Sbjct: 1148 HLFGDSLRLGQVLINLMNNAIKFT-ERGEVLLSLNLVEQQNDDVVLRFSVRDSGIGLTAD 1206

Query: 361  MLEDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRY 415
                +F+ F      T  K G  GLGL  C++++   GGTI   SQ G  + F  +    
Sbjct: 1207 QQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGVESQFGHGSTFYFTVKLQ 1266

Query: 416  DSDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGF---TAISAQQAVRRQDYE 472
             S        + L+   ++ +  + A  R++ +  +E   GF   T  S ++AV R   +
Sbjct: 1267 ISSGQKLTVAQELEGMPIL-VADDNATARDIMRTTLES-MGFRVDTVRSGEEAVTRCIQQ 1324

Query: 473  FEFDLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAV----NINRYLRIQP 528
             E+ + L+D          +P L+G +  A+          +   V    N +   +I+ 
Sbjct: 1325 -EYAVALIDWK--------MPNLDG-IETAKQIKQQAKKAPRILMVSAHANQDFLSQIEE 1374

Query: 529  ISIHSILRKPRKIIERLLFEQESLSMNR-NVIPLQKSRHE-----------RRILVVDDN 576
            + +   + KP  I    L +    S+ R  V+P+++               +RIL+V+DN
Sbjct: 1375 LGLAGYISKP--ISASRLLDGIINSLGRAGVLPVRRQSESIDPKLLLPLKGKRILLVEDN 1432

Query: 577  QSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNS 636
            +         LEQ G  +  A +G   L  +E Q+ DLVLMD +MP + G +AT+ +R  
Sbjct: 1433 EMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQATQALR-K 1491

Query: 637  EHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVL 678
              E   +P++  T +       +   +GMND I KP + ++L
Sbjct: 1492 RPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLL 1533



 Score = 50.1 bits (118), Expect = 9e-10
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 2/113 (1%)

Query: 570  ILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEA 629
            ILV DDN + R      LE  G+ V     G E +     Q   + L+D +MPN+ G+E 
Sbjct: 1284 ILVADDNATARDIMRTTLESMGFRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIET 1343

Query: 630  TRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKV 682
             + I+    +   I ++  +   +   L+ ++  G+  +I KP     LL+ +
Sbjct: 1344 AKQIKQQAKKAPRILMV--SAHANQDFLSQIEELGLAGYISKPISASRLLDGI 1394