Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (268), Expect = 3e-27
 Identities = 136/533 (25%), Positives = 225/533 (42%), Gaps = 62/533 (11%)

Query: 188  FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
            F A ++HE+R P++A+          I   Q A  T  SL AQ+ D L +    A  ++ 
Sbjct: 725  FLANMSHEIRTPMNAI----------IGMLQLAQRT--SLTAQQKDYLEKAGFSAQSLLR 772

Query: 248  SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVHQPFD- 306
              N+ +D       +  +    F    V+D    A+     K  A +  VEL ++ P   
Sbjct: 773  IINDILDFSKIEAGKLELERVPFPLDKVLD---HALDLNALK--AQEQGVELLLYAPVTA 827

Query: 307  ---FFGSDTLLTYALFNLLKNA--FYYQKEHFSVCISIEQTSEHNLIR--VRDNGVGIAP 359
                 G    L   L NLL NA  F    E    C  + +      ++  VRD G+GI+ 
Sbjct: 828  GLILKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGERDHRITLKFWVRDTGIGISK 887

Query: 360  EMLEDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWT--EFVLSF 412
            +  E +F  F      T  K G  GLGL   + ++S  GG ++  S+ G  +   F +SF
Sbjct: 888  DQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVGSTFSFTISF 947

Query: 413  PRYDSDTVNEIKT-ELLKTKSLIYIGSNQAIVRELNQLAVEDEFGF-TAISAQQAVRRQD 470
               +   V  +   E L     + +  N   ++  + L  +  F   TA S  +A+ +  
Sbjct: 948  EIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQIYSALMRDFHFEVDTAASGAEALYKLS 1007

Query: 471  YEFEFDLILLDLDDATAQGELLPKLEG-------TLSFAEGCIGY--VYDPGKTYAVNIN 521
             +   DL+LLD         ++P+++G           AEG I    +      YA    
Sbjct: 1008 RD-PIDLLLLDW--------MMPEMDGGDVISAIDTMVAEGRIAKRPIIIMMTAYAAEPL 1058

Query: 522  RYLRIQPISIHSILRKPRKI------IERLLFEQESLSMNRNV--IPLQKSRHERRILVV 573
            ++  +   ++ ++L+KP K       I     ++  L++ + +  +P+++  H   +L+V
Sbjct: 1059 QH-EVDSANVFAVLQKPFKASSLFDEIIAAFADEPRLNVVQPIDELPVEEGEHTGLVLLV 1117

Query: 574  DDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLI 633
            +DN   +     LL+  GYEVV A +G   L  ++S+  D VLMDI+MP + GL A R +
Sbjct: 1118 EDNFINQQVATELLKSAGYEVVVAGNGQIALDIIDSRPFDAVLMDIQMPVMDGLTAARAL 1177

Query: 634  RNSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAWV 686
            R        +PII  T             +GMN  I KP     L   ++ W+
Sbjct: 1178 R-ERFSADVLPIIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFETLSHWI 1229