Pairwise Alignments

Query, 1013 a.a., nuclease SbcCD subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 1043 a.a., Nuclease SbcCD subunit C from Enterobacter sp. TBS_079

 Score =  285 bits (730), Expect = 9e-81
 Identities = 311/1093 (28%), Positives = 492/1093 (45%), Gaps = 161/1093 (14%)

Query: 1    MRPLKLILQAFGPFAGREEIDFTK--LGDAPLFLINGATGAGKSSILDAICYALYGETTG 58
            M+ L L L+      G  +IDFT        LF I GATGAGK+++LDAIC ALY ET  
Sbjct: 1    MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60

Query: 59   ----SERTGDQMRCDYAAPESLTEVIFEFELAGARYQI-------TRQPDQEIPKKRGEG 107
                S+   D M  D A  E L EV  EFE+ G  Y+          QPD  +   R E 
Sbjct: 61   LQKVSQAQNDLMTRDTA--ECLAEV--EFEVKGIAYRAFWSQNRARNQPDGNLQAPRVE- 115

Query: 108  MTKKSHSATLVALKSDGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRELLTA 167
                      +A   DG +++A+K +   +    L GLD  +F + M+L QG+F   L A
Sbjct: 116  ----------LARCEDG-KILADKVSDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNA 164

Query: 168  NSKEREQIFGQLFQTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQT 227
               +R ++  +L  T++Y QI   +FE+    R   E ++ Q  G +    L SEEQ Q 
Sbjct: 165  RPSDRAELLEELTGTEIYGQISAMVFEKHKAARNALEVYEAQAAGVV----LLSEEQ-QQ 219

Query: 228  ELTELAPVLTHAQSQLKAEQQ------QWDETKAHYQAALELEQQFIRKQQLVVEIATHQ 281
            +L +    LT  +  L A+QQ      QW          L    + IR+QQ V  +    
Sbjct: 220  QLQQSLQALTDEEKTLLAQQQNQQKDFQW----------LTRNDELIREQQRVATLQQQA 269

Query: 282  EQA-THIEMLRQQRQQAQKAARLTAVHQQWHQAQKNLQQAKLKVEQQQTLLQ-------- 332
            +QA T         Q A  AA+L  +     +    L Q K ++ +    LQ        
Sbjct: 270  QQALTEAAPELATLQLAHPAAQLRPLWDSQQEQTTRLGQTKQRIVEVNARLQAKTALRSR 329

Query: 333  -QAKAQQQQAQQASQQASLA--CEEVPKLNE--QRITWQRAEQKLLAQENVQQA-----V 382
             +  AQ+  AQ  +   +LA    E  +  +  Q I   RA      ++  Q A     +
Sbjct: 330  IRNTAQRSHAQLQTDLTALAQWLTEHERYRQWGQEIAGWRAHFAQRNRDKTQIATLSTRI 389

Query: 383  AKAERELQLATQNALNL--QQASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMNQLVQQ 440
            A+  ++L    +NAL L   + S  +EQ+ Q++         Q   L +Q+ R+ Q  + 
Sbjct: 390  AELRQKLAEMPENALTLTADEVSVAMEQQAQSRTFRQRLMSLQARYLPLQQ-RLRQNGES 448

Query: 441  VQAREREQSLLNELQTAQQALLRFEQQHH-HIQTQAEQAKLTADKLEFAWHTQRAAELAL 499
            +Q  + EQ  LNE  T ++   + + QH+  ++T   Q     +K++ +   +RA     
Sbjct: 449  LQKAQAEQVKLNETLTLRRQQYKEKNQHYLDLETLCRQE----EKIK-SLEAERAQ---- 499

Query: 500  ALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQQQDWVQRQ-----QEAFHAWQQ 554
             L   +PCP+CGS  HP    Y    ++      A QQ++D + ++     +E      Q
Sbjct: 500  -LQAGQPCPLCGSTSHPAVTAYQALELS------ANQQRRDQLAKEVAALKEEGLLVLGQ 552

Query: 555  QGFKTEQIAQNLTTLSSELTLQQVALLNELIEQQQILHSDIAALQQLNPDLLKRQIEEGE 614
                T QI Q  T  +  L+ ++ AL  E       L+  +   + + P + +++  E +
Sbjct: 553  VNALTRQI-QRETDDAQTLSQEEQALTKEWQSVCASLNITLNIQEDIAPWMNEQEQYERQ 611

Query: 615  QRLAHTKMTLEKQ--------NQNQQQAWQTLAQLQAELASLRQEIPPE------LSDLD 660
                  ++TL++Q         Q QQQ   T   L+  L +L   +P E      L++ +
Sbjct: 612  LYQLSQRLTLQQQLNEQDAQARQYQQQLTATRQALETTLLTLSLNVPEEGTEAAWLNERE 671

Query: 661  TLRSAIGRVQNQIEILQK-------------------AEHTAREQWVQAQKQFASVQAAY 701
            T  +     Q Q  ++Q+                    E    + W +   +  S+Q+  
Sbjct: 672  TEFAQWQEKQTQHGVMQERMTALMPLLDTLPATNDTETEPAIPDNWRETHDECVSLQSQL 731

Query: 702  QAAIEAHR-ESQRQQEETTSAWQQGLLHSGFSDESAYLAARLTDEAIVNIERQIA----Q 756
                +    ES+R Q  TT  +   L  S F+D  A+LAA L +E I  +E +      Q
Sbjct: 732  ATLQQQESLESERLQHATTH-FTAALTASCFADREAFLAALLDEETIRRLEHRKQTLENQ 790

Query: 757  YEERSAMLSGEQQALSRKLAEKNRPELEPLLVKVTQAE-EKMALALQAFTQHQSRMDGLQ 815
             ++ +A+ +   Q L     +  RPE   L     Q + +++   L+  T HQ     ++
Sbjct: 791  LQQATALFAQANQQLQAH--QTQRPEGLELDAPTLQLQLQQLGQQLRENTTHQGE---IR 845

Query: 816  RVAKQLADLYQKNRALEAEYQVVGTLSD-------IANGKTGAKVSLHRFVLGVLLDDVL 868
            +  KQ +D  Q  + L    +    L+D       +    TG K    +F  G+ LD+++
Sbjct: 846  QQLKQDSDNRQHQQVLMQHIEEAARLADDWSYLNSLIGSSTGDK--FRKFAQGLTLDNLV 903

Query: 869  LQASQRLMKMSRGRYLLKRKEERAKGNVGSGLDLMVEDSYSGKW-RDVATLSGGESFMAA 927
              A+Q+L ++  GRYLL+RK       V   L+L V D++     RD  TLSGGESF+ +
Sbjct: 904  WLANQQLNRL-HGRYLLQRK-------VSDALELEVVDTWQADAVRDTRTLSGGESFLVS 955

Query: 928  LSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAIQTLIDLQQGGRTIGIISHV 987
            L+LAL LSD+V   S   R+D+LF+DEGFG+LD E+LD A+  L  L   G+TIG+ISHV
Sbjct: 956  LALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHV 1012

Query: 988  TELKEQIGLRLDV 1000
              +KE+I +++ V
Sbjct: 1013 EAMKERIPVQIKV 1025