Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Exonuclease SbcD from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (290), Expect = 1e-30
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 18/266 (6%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           ++  HTSDWHLG+  H      + +  L  L+  L     D +++AGDI+D   PP  A 
Sbjct: 1   LRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLAGEKPDVLLIAGDIFDTVNPPVKAQ 60

Query: 61  D-LLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFA------DFEQMM 113
           + L D +VS         ++MI GNHD   R+   A  M+    H         D +  +
Sbjct: 61  ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV 120

Query: 114 QPLVLHSPQA-GEVAFW--GMPYHDPELVRHYYHND--ITTHDAAHQFLCESILAQRNPS 168
           + L+L  P A G+V  W   +P+  P  V      D  +      H++L  +  ++R   
Sbjct: 121 ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANSKRKKG 180

Query: 169 QRHVLISHCFVDGAMESE-SERPLSIGGSDRVDHRHFLP-FDYVALGHLHQPQ-MKGAEH 225
           Q  + ISH  + G   SE SER L IG ++ +    F P   YVALGHLH+PQ + G E 
Sbjct: 181 QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER 240

Query: 226 IRYSGSLMKYSFGE---QHQNKGATL 248
           IRYSGS +  SF E   QHQ    TL
Sbjct: 241 IRYSGSPIPLSFSEIGYQHQILDITL 266