Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., exonuclease sbcCD subunit D from Klebsiella michiganensis M5al

 Score =  114 bits (286), Expect = 4e-30
 Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 23/298 (7%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           M+ LHTSDWHLG+ F+  S   +  A L  L+   +++ VDA+IVAGDI+D   PP+ A 
Sbjct: 1   MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLASAQEHDVDAIIVAGDIFDTGSPPSYAR 60

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120
           +L +  V V   +    L+++ GNHD    L  +   +      + A+       L L  
Sbjct: 61  ELYNRFV-VQLQQTGCRLVVLAGNHDSVATLNESRDILAFLKTTVVANAGHAPFILPLRD 119

Query: 121 PQAGEVAFWGMPYHDP-ELV-----------RHYYHNDITT-HDAAHQFLCESILAQRNP 167
              G V F  +P+  P ELV           +    N I+  +   +Q  CE    + + 
Sbjct: 120 GTPGAV-FCPVPFLRPRELVTSQAGHSSGEKQQQLLNAISDYYQQQYQQACE---LRGDR 175

Query: 168 SQRHVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ-MKGAEHI 226
           +   +   H    GA +S++ R + IG  D      F P DY+ALGH+H+ Q + G EHI
Sbjct: 176 ALPIIASGHLTTVGASKSDAVREIYIGTLDAFPANRFPPADYIALGHIHRAQVVGGCEHI 235

Query: 227 RYSGSLMKYSFGEQHQNKGATLVELGQQGFISATHIPLIAP--HQMRIIEGELEAILA 282
           RYSGS +  SF E  ++K   LV          T  PLI P    + +++G+  ++ A
Sbjct: 236 RYSGSPIALSFDETGKSKSVNLVTFSAGRLTDVT--PLIVPITQPLAVLKGDFASVSA 291