Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Nuclease SbcCD subunit D from Enterobacter sp. TBS_079

 Score =  123 bits (308), Expect = 1e-32
 Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           M+ LHTSDWHLG+ F+  S   +  A L  L+D  R + VDA+IVAGDI+D   PP+ A 
Sbjct: 1   MRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLDTARSHEVDAIIVAGDIFDTGSPPSYAR 60

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120
           +L +  V V   +    L+++ GNHD    L  +   +      + A      Q L    
Sbjct: 61  ELYNRFV-VNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRD 119

Query: 121 PQAGEVAFWGMPYHDPELV----------RHYYHNDITTHDAAHQFLCESILAQRNPSQR 170
              G V    +P+  P  +              H      D  HQ   ++   + + +  
Sbjct: 120 GTPGAV-LCPIPFLRPRDIVQSQAGLSGAEKQQHLLQAITDYYHQQHAQACALRGDQAIP 178

Query: 171 HVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ-MKGAEHIRYS 229
            +   H    GA +S++ R + IG  D    ++F P DY+ALGH+H+ Q + G EHIRY 
Sbjct: 179 VIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQVIGGCEHIRYC 238

Query: 230 GSLMKYSFGEQHQNKGATLVEL--GQQGFISATHIPLIAPHQMRIIEGELEAILA 282
           GS +  SF E  + K   LV    G+   +    +P+  P  + +++G+L+AI A
Sbjct: 239 GSPISLSFDETGKAKSVHLVSFSDGKLSAVDTLEVPVTQP--LAVLKGDLDAITA 291