Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., putative exonuclease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 21/272 (7%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           ++ LHT+DWHLG+ F      ++  A L  L + +R N +DA+++AGD++D S P  A+ 
Sbjct: 2   IRILHTADWHLGQTFFGYDRAEEHKAFLDWLAEEIRQNEIDALVIAGDVFDVSNPSAASQ 61

Query: 61  DLLDEVVSVICGE-LKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFA----------DF 109
            +  E +  +  E  K  ++++ GNHD A RL      ++     +            D+
Sbjct: 62  RIYYEFIYRVTAENPKLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGEIDY 121

Query: 110 EQMMQPLVLHSPQAGEVAFWGMPY---HDPELVRHYYHNDITTHDAAHQFLCESILAQRN 166
           + +   L     +  EV    +P+    D  +V    +  +      +  L + + A+R 
Sbjct: 122 DHLTIELKNREGEV-EVLCMAVPFLRQGDYPVVETEGNPYMEGVRELYARLLQRLWARRK 180

Query: 167 PSQRHVLISHCFVDGAMESE---SERPLSIGGSDRVDHRHFL-PFDYVALGHLHQPQ-MK 221
            +Q  + + H    G+  +E   SER + IGG + V    F     Y ALGH+H+ Q + 
Sbjct: 181 TNQAILAVGHLQATGSEIAEKDYSERTV-IGGLECVSPDTFSEKIAYTALGHIHKAQRVS 239

Query: 222 GAEHIRYSGSLMKYSFGEQHQNKGATLVELGQ 253
           G E++RY+GS +  SF E+H + G  +V L +
Sbjct: 240 GRENVRYAGSPIPMSFAEKHYHHGVVMVILDE 271