Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Fructose repressor FruR, LacI family from Pseudomonas fluorescens FW300-N2E2

 Score =  288 bits (736), Expect = 2e-82
 Identities = 159/327 (48%), Positives = 217/327 (66%), Gaps = 2/327 (0%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           + L +IA+LAGVS TTASYVINGKA++ RIS  T  +V AVV+++ F P+  A+ LR+ +
Sbjct: 1   LKLSDIAQLAGVSVTTASYVINGKAEQQRISSATVERVRAVVQEHGFTPNPQAAGLRSRH 60

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           +R+ G I+PDLEN SYAR+AKLLEQ +R  GYQ+LIA SDD P  E    +   +RR DA
Sbjct: 61  TRTLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDAPDSERQLLQLFRARRCDA 120

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L VAS +P+  + YL+LQ  G P+IAIDR +D   F  VIS+D  A+ +LTRS+L     
Sbjct: 121 LIVASCLPAGDDSYLQLQAKGIPIIAIDRVMDPARFCSVISDDRQASLQLTRSLLETHPR 180

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVAN-DQLP 239
            + L+ A PEL++S+ER  GF  A+        + +GE F+RE GR++  + +A    LP
Sbjct: 181 QIALISARPELSISQERTAGFNEALAGFEGQVLIEHGESFSRECGRQLMDEMLARLGHLP 240

Query: 240 DAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           DA++ TSY LL+G+ D L + P   + +RL TFGD +LLDFLP+ VN++ QQ +LIAD A
Sbjct: 241 DALITTSYVLLQGVFDALHDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMSQQHQLIADKA 300

Query: 300 LALALNA-SAKRYQTGIELIPRQLKVR 325
           L LAL A     YQ G++ I R  K R
Sbjct: 301 LELALAAIENDDYQPGVQAIARTFKQR 327