Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., LacI family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  105 bits (261), Expect = 2e-27
 Identities = 76/264 (28%), Positives = 136/264 (51%), Gaps = 13/264 (4%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A LAG+S TT S+V+N   +   +SE+ + KV A +E+ ++ P   A +L+A  +
Sbjct: 3   TIKDVAALAGISYTTVSHVVN---KTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTT 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL++P+  N  +A LA+ +E    + GY +++  SDD+P  + +    L+ +RID L
Sbjct: 60  ATIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGL 119

Query: 122 FVAS--GIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCV-ISEDFGAAFELTRSVLTQD 178
             AS  G    +E    L    TP++ +DR L+      V I  ++G A+  TR +L   
Sbjct: 120 IFASAGGDVGLAE---GLASVRTPMVIVDRGLEGVDADLVRIDHEYG-AYLATRHLLELG 175

Query: 179 VHSVGLVGALPELNVSREREQGFAMAVKQRG--LPTTLGYGEHFNREEGRKVFAKWVAND 236
            H +  +G   + +V++ R  G+  A+K+ G  LP        F    G +  A+ +   
Sbjct: 176 HHDIAFIGGPADTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQ-LLEQ 234

Query: 237 QLPDAVVATSYTLLEGILDVLLEQ 260
           + P A+ A +  +  G+L    E+
Sbjct: 235 RPPSAIFAANDMIGIGVLRAAAER 258