Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., D-fructose-responsive transcription factor from Pseudomonas stutzeri RCH2

 Score =  290 bits (743), Expect = 3e-83
 Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 2/327 (0%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           M L +IA+LA VS TTASYV+NGKA + RIS  T  +VMAV EQ  F+ D  A+ LR G 
Sbjct: 1   MKLTDIARLANVSVTTASYVLNGKAAQRRISPATVERVMAVAEQQGFQLDQQAAGLRRGQ 60

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           SR+ G I+PDLEN SYARLAKLLEQ +RQ GYQ+LIA +DD+P  E    + L SRR DA
Sbjct: 61  SRTLGFIVPDLENPSYARLAKLLEQRARQRGYQLLIAGTDDEPDTERQLIQLLRSRRCDA 120

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L VAS +P   + Y K+Q +GTPVIA+DRALD E F  V+S+D  AA  LTRS+      
Sbjct: 121 LIVASCLPGDDQSYRKVQAAGTPVIALDRALDAEQFCSVVSDDLEAAALLTRSLAVPARA 180

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQLPD 240
            + L+ A P L +S++RE+GF  A+ Q     ++   E F+R  GR+     +    LPD
Sbjct: 181 HIALISARPALPISQQREEGFRQALSQHTGQVSILRAEQFSRTCGREQMLALLDRGPLPD 240

Query: 241 AVVATSYTLLEGILDVLLEQPELM-QKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           A++ T+Y LLEG+ D L E+  L  + +RLATFGD +LLDFLPIRVN++ QQ E IA+  
Sbjct: 241 ALITTAYVLLEGVFDALRERDLLWPEHLRLATFGDAQLLDFLPIRVNAISQQHEQIAERT 300

Query: 300 LALALNA-SAKRYQTGIELIPRQLKVR 325
           L  A+ A     Y+ G+  I R+LKVR
Sbjct: 301 LEQAIRAIEQSDYRPGVIAIERELKVR 327