Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Transcriptional regulator, LacI family from Xanthomonas campestris pv. campestris strain 8004

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 8/303 (2%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +T+ ++A+ A VS  T S  +NG      ++   +  V+ V E+  + P  AA +L +  
Sbjct: 6   VTIKDVAREARVSVATVSRALNGHDN---VAGPVRQVVLDVAERLRYSPHAAARSLSSRR 62

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           +++ G+++PDL    ++ L + ++  +R AG  +L++    DP+ +  A  ++   R+D 
Sbjct: 63  TQTLGVVLPDLYGEFFSELIRGIDGAARAAGQHLLVSSYHGDPEAQGRALRSM-RGRVDG 121

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L V S       +         P + I+  L    +  +  +D   A  +T  +L     
Sbjct: 122 LLVLSPYAEQPGFLTDNLPQALPTVLINAHLPGADYPVLSIDDHAGAMAMTEHLLAAGHR 181

Query: 181 SVGLVGALPELNV-SREREQGFAMAVK-QRGLPTTLGYGEHFNREEGRKVFAKWVANDQL 238
            +  +G  P LN  +RER +GF  A+    G    L +   F+   G +     +A   L
Sbjct: 182 RIAFIGG-PALNFDARERLRGFRDAIAGHAGGAEGLEFAGDFDEASGHRAGLAMLAAGDL 240

Query: 239 PDAVVATSYTLLEGILDVLLE-QPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIAD 297
           PDAV A +     G L    +    +   V LA F D  L  F+   + ++      + +
Sbjct: 241 PDAVFAANDMTALGCLYAFAQADVSVHDDVALAGFDDIPLARFVHPALTTMRVSIARLGE 300

Query: 298 SAL 300
            A+
Sbjct: 301 QAM 303